9KI0
structure of DdmD dimer with ssDNA with AGS
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Helicase/UvrB N-terminal domain-containing protein | polymer | 1195 | 136556.8 | 2 | UniProt (Q9KR72) | Vibrio cholerae O1 biovar El Tor str. N16961 | |
| 2 | C (C) | DNA (5'-D(P*CP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3') | polymer | 10 | 2982.0 | 1 | synthetic construct | ||
| 3 | D (D) | DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3') | polymer | 10 | 2997.0 | 1 | synthetic construct | ||
| 4 | E, G (A, B) | PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | non-polymer | 523.2 | 2 | Chemie (AGS) | |||
| 5 | F, H (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) |
Sequence modifications
A, B: 1 - 1190 (UniProt: Q9KR72)
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Leu -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 279092.5 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1095.1 | |
| All* | Total formula weight | 280187.6 |
