9KHZ
Structure of DdmD dimer with ssDNA with ADP bound
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Helicase/UvrB N-terminal domain-containing protein | polymer | 1195 | 136556.8 | 2 | UniProt (B9TSM3) UniProt (by SIFTS) (Q9KR72) | Vibrio cholerae | |
| 2 | C (C) | DNA (5'-D(P*CP*CP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3') | polymer | 11 | 3271.1 | 1 | synthetic construct | ||
| 3 | D (D) | DNA (5'-D(P*CP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3') | polymer | 11 | 3286.2 | 1 | synthetic construct | ||
| 4 | E, F (A, B) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 2 | Chemie (ADP) |
Sequence modifications
A, B: 1 - 1190 (UniProt: B9TSM3)
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Leu -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 279670.8 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 854.4 | |
| All* | Total formula weight | 280525.2 |
