9KET
Cryo-EM structure of Mycobacterium tuberculosis transcription activation complex with two PhoP molecules(composite map)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | DNA-directed RNA polymerase subunit alpha | polymer | 347 | 37745.3 | 2 | UniProt (P9WGZ1) Pfam (PF01193) Pfam (PF01000) Pfam (PF03118) | Mycobacterium tuberculosis H37Rv | RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha |
| 2 | C (C) | DNA-directed RNA polymerase subunit beta | polymer | 1178 | 130018.8 | 1 | UniProt (P9WGY9) Pfam (PF04563) Pfam (PF04561) Pfam (PF04565) Pfam (PF10385) Pfam (PF00562) Pfam (PF04560) | Mycobacterium tuberculosis H37Rv | RNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta |
| 3 | D (D) | DNA-directed RNA polymerase subunit beta' | polymer | 1316 | 146969.0 | 1 | UniProt (P9WGY7) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) | Mycobacterium tuberculosis H37Rv | RNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta' |
| 4 | E (E) | DNA-directed RNA polymerase subunit omega | polymer | 110 | 11851.1 | 1 | UniProt (P9WGY5) Pfam (PF01192) | Mycobacterium tuberculosis H37Rv | RNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega |
| 5 | F (H) | Non-template strand DNA | polymer | 76 | 23296.8 | 1 | Mycobacterium tuberculosis H37Rv | ||
| 6 | G (G) | Template strand DNA | polymer | 76 | 23747.2 | 1 | Mycobacterium tuberculosis H37Rv | ||
| 7 | H (F) | RNA polymerase sigma factor SigA | polymer | 528 | 57877.2 | 1 | UniProt (P9WGI1) Pfam (PF00140) Pfam (PF04542) Pfam (PF04539) Pfam (PF04545) | Mycobacterium tuberculosis H37Rv | Sigma-A |
| 8 | I, J (J, K) | Possible two component system response transcriptional positive regulator PhoP | polymer | 270 | 30569.7 | 2 | UniProt (P71814) Pfam (PF00072) Pfam (PF00486) | Mycobacterium tuberculosis H37Rv | |
| 9 | K, L (D) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) PubChem (32051) | |||
| 10 | M (D) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) PubChem (888) |
Sequence modifications
J, K: -22 - 247 (UniProt: P71814)
| PDB | External Database | Details |
|---|---|---|
| Met 37 | - | insertion |
| Tyr 38 | - | insertion |
| Cys 39 | - | insertion |
| Pyl 40 | - | insertion |
| Ala 41 | - | insertion |
| Cys 42 | - | insertion |
| Thr 43 | - | insertion |
| Glu 44 | - | insertion |
| Arg 45 | - | insertion |
| Ile 46 | - | insertion |
| Sec 47 | - | insertion |
| Met 48 | - | insertion |
| Thr 49 | - | insertion |
| Sec 50 | - | insertion |
| Glu 51 | - | insertion |
| Arg 52 | - | insertion |
| Cys 53 | - | insertion |
| Sec 54 | - | insertion |
| Leu 55 | - | insertion |
| Pyl 56 | - | insertion |
| Ser 57 | - | insertion |
| Ile 58 | - | insertion |
| Ser 59 | - | insertion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 530390.2 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 155.1 | |
| All* | Total formula weight | 530545.4 |
