Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9JQN

CryoEM structure of mouse RAG SEC-2DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
V(D)J recombination-activating protein 1polymer1040119389.42UniProt (P15919)
Pfam (PF12560)
Pfam (PF26105)
Pfam (PF00097)
Pfam (PF10426)
Pfam (PF12940)
Pfam (PF26024)
Pfam (PF26025)
Pfam (PF26100)
Pfam (PF26101)
Pfam (PF26104)
Mus musculus (house mouse)RAG-1
2B, D
(B, D)
V(D)J recombination-activating protein 2polymer52759138.42UniProt (P21784)
Pfam (PF03089)
Pfam (PF13341)
Mus musculus (house mouse)RAG-2
3E
(G)
DNA (5'-D(P*AP*TP*TP*TP*GP*CP*AP*TP*CP*AP*CP*TP*GP*TP*G)-3')polymer154575.01Escherichia coli
4F
(L)
DNA (5'-D(*CP*AP*CP*AP*GP*TP*GP*AP*TP*AP*CP*AP*GP*CP*C)-3')polymer154563.01Escherichia coli
5G
(M)
DNA (5'-D(*CP*AP*CP*AP*GP*TP*GP*AP*TP*GP*CP*AP*AP*AP*T)-3')polymer154602.01Escherichia coli
6H
(F)
DNA (5'-D(P*GP*GP*CP*TP*GP*TP*AP*TP*CP*AP*CP*TP*GP*TP*G)-3')polymer154616.01Escherichia coli
7I, K
(H, E)
DNA (5'-D(*CP*AP*GP*GP*CP*CP*AP*GP*AP*TP*CP*CP*A)-3')polymer133945.62Escherichia coli
8J, L
(I, J)
DNA (5'-D(P*TP*GP*GP*AP*TP*CP*TP*GP*GP*CP*CP*TP*G)-3')polymer133998.62Escherichia coli
9M, O
(A, C)
CALCIUM IONnon-polymer40.12Chemie (CA)
10N, P
(A, C)
ZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight391299.9
Non-Polymers*Number of molecules4
Total formula weight211.0
All*Total formula weight391510.9
*Water molecules are not included.

248335

PDB entries from 2026-01-28

PDB statisticsPDBj update infoContact PDBjnumon