9JQA
Cryo-EM Structure of Fructose Dehydrogenase Variant from Gluconobacter japonicus Truncating Heme 1c and C-Terminal Hydrophobic Regions
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Fructose dehydrogenase large subunit | polymer | 544 | 59798.3 | 1 | UniProt (M1VMF7) Pfam (PF00732) Pfam (PF13450) Pfam (PF05199) | Gluconobacter japonicus | Fructose dehydrogenase subunit I |
| 2 | B (B) | Fructose dehydrogenase small subunit | polymer | 183 | 20106.7 | 1 | UniProt (M1VB40) Pfam (PF12318) | Gluconobacter japonicus | Fructose dehydrogenase subunit III |
| 3 | C (C) | Fructose dehydrogenase cytochrome subunit | polymer | 320 | 34431.4 | 1 | UniProt (M1V1V5) Pfam (PF00034) Pfam (PF13442) | Gluconobacter japonicus | Fructose dehydrogenase subunit II |
| 4 | D (A) | FLAVIN-ADENINE DINUCLEOTIDE | non-polymer | 785.5 | 1 | Chemie (FAD) | |||
| 5 | E (A) | FE3-S4 CLUSTER | non-polymer | 295.8 | 1 | Chemie (F3S) | |||
| 6 | F, G (C) | HEME C | non-polymer | 618.5 | 2 | Chemie (HEC) |
Sequence modifications
C: 144 - 169 (UniProt: M1V1V5)
C: 170 - 463 (UniProt: M1V1V5)
C: 170 - 463 (UniProt: M1V1V5)
| PDB | External Database | Details |
|---|---|---|
| - | Gly 454 | deletion |
| - | Val 455 | deletion |
| - | Met 456 | deletion |
| - | Leu 457 | deletion |
| - | Leu 458 | deletion |
| - | Leu 459 | deletion |
| - | Gly 460 | deletion |
| - | Thr 461 | deletion |
| - | Gly 462 | deletion |
| - | Gly 463 | deletion |
| - | Ile 464 | deletion |
| - | Leu 465 | deletion |
| - | Gly 466 | deletion |
| - | Ala 467 | deletion |
| - | Ile 468 | deletion |
| - | Leu 469 | deletion |
| - | Val 470 | deletion |
| - | Val 471 | deletion |
| - | Ala 472 | deletion |
| - | Gly 473 | deletion |
| - | Leu 474 | deletion |
| - | Trp 475 | deletion |
| - | Trp 476 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 114336.4 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 2318.4 | |
| All* | Total formula weight | 116654.8 |
