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9JH9

Cryo-EM structure of CpAgo_gDNA-tg_ssDNA dimeric ternary complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, B)
Clostridium perfringen Argonaute(CpAgo)polymer75186285.22UniProt (by SIFTS) (A0AAW4IU58)Clostridium perfringens
2B, E
(C, D)
DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3')polymer216588.32synthetic construct
3C, F
(E, F)
DNA (5'-D(*AP*CP*T*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3')polymer216311.12synthetic construct
4G, H, I, J
(C, E, D, F)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight198369.2
Non-Polymers*Number of molecules4
Total formula weight219.8
All*Total formula weight198589.0
*Water molecules are not included.

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PDB entries from 2026-01-14

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