9JGD
Crystal structure of Nep1 in complex with 5'-methylthioadenosine from Pyrococcus horikoshii OT3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Ribosomal RNA small subunit methyltransferase Nep1 | polymer | 229 | 26926.4 | 1 | UniProt (O50087) Pfam (PF03587) | Pyrococcus horikoshii OT3 | 16S rRNA (pseudouridine-N1-)-methyltransferase Nep1 |
| 2 | B (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 3 | C (A) | 5'-DEOXY-5'-METHYLTHIOADENOSINE | non-polymer | 297.3 | 1 | Chemie (MTA) | |||
| 4 | D (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 5 | E, F (A) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 6 | G (A) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 7 | H (A) | water | water | 18.0 | 90 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 26926.4 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 638.1 | |
| All* | Total formula weight | 27564.5 |
