9JAV
Crystal structure of NAD-dependent methanol dehydrogenase 2 from Bacillus methanolicus MGA3 in complex with NAD+
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | NAD-dependent methanol dehydrogenase | polymer | 393 | 41811.8 | 10 | UniProt (I3E2P9) Pfam (PF00465) UniProt (by SIFTS) (I3E949) | Bacillus methanolicus MGA3 | |
| 2 | AA, CA, K, M, O... (I, J, A, B, C...) | MANGANESE (II) ION | non-polymer | 54.9 | 10 | Chemie (MN) | |||
| 3 | DA, L, N, P, R... (J, A, B, C, D...) | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 8 | Chemie (NAD) | |||
| 4 | BA, X (I, G) | ADENOSINE-5-DIPHOSPHORIBOSE | non-polymer | 559.3 | 2 | Chemie (APR) | |||
| 5 | EA, FA, GA, HA, IA... (A, B, C, D, E...) | water | water | 18.0 | 1133 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J: 1 - 385 (UniProt: I3E2P9)
| PDB | External Database | Details |
|---|---|---|
| Thr 2 | Lys 2 | conflict |
| Phe 9 | Tyr 9 | conflict |
| Asp 30 | Gly 30 | conflict |
| Gly 46 | Ser 46 | conflict |
| Ser 54 | Ala 54 | conflict |
| Ser 55 | Gly 55 | conflict |
| Ala 59 | Glu 59 | conflict |
| Ser 65 | Ala 65 | conflict |
| Lys 118 | Thr 118 | conflict |
| Glu 130 | Lys 130 | conflict |
| Val 285 | Ile 285 | conflict |
| Tyr 289 | His 289 | conflict |
| Asp 320 | Glu 320 | conflict |
| Lys 334 | Arg 334 | conflict |
| Lys 361 | Asn 361 | conflict |
| Leu 386 | - | expression tag |
| Glu 387 | - | expression tag |
| His 388 | - | expression tag |
| His 389 | - | expression tag |
| His 390 | - | expression tag |
| His 391 | - | expression tag |
| His 392 | - | expression tag |
| His 393 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 418118.1 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 6975.4 | |
| All* | Total formula weight | 425093.5 |
