9J8O
Cryo-EM structure of BAF-Lamin A/C IgF-H1-nucleosome complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E, O, S (A, E, a, e) | Histone H3.1 | polymer | 139 | 15719.4 | 4 | UniProt (P68431) Pfam (PF00125) | Homo sapiens (human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l |
2 | B, F, P, T (B, F, b, f) | Histone H4 | polymer | 106 | 11676.7 | 4 | UniProt (P62805) Pfam (PF15511) | Homo sapiens (human) | |
3 | C, G, Q, U (C, G, c, g) | Histone H2A type 1-B/E | polymer | 133 | 14447.8 | 4 | UniProt (P04908) Pfam (PF00125) Pfam (PF16211) | Homo sapiens (human) | Histone H2A.2,Histone H2A/a,Histone H2A/m |
4 | D, H, R, V (D, H, d, h) | Histone H2B type 1-J | polymer | 129 | 14217.5 | 4 | UniProt (P06899) Pfam (PF00125) | Homo sapiens (human) | Histone H2B.1,Histone H2B.r,H2B/r |
5 | I, W (I, i) | DNA (193-MER) | polymer | 193 | 59351.8 | 2 | synthetic construct | ||
6 | J, X (J, j) | DNA (193-MER) | polymer | 193 | 59823.1 | 2 | synthetic construct | ||
7 | K, L, Y, Z (K, L, k, l) | Barrier-to-autointegration factor | polymer | 93 | 10487.1 | 4 | UniProt (O75531) Pfam (PF02961) | Homo sapiens (human) | Breakpoint cluster region protein 1 |
8 | AA, M (M, m) | Lamin-A/C | polymer | 158 | 17551.4 | 2 | UniProt (P02545) Pfam (PF00932) | Homo sapiens (human) | 70 kDa lamin,Renal carcinoma antigen NY-REN-32 |
9 | BA, N (N, n) | Histone H1.1 | polymer | 221 | 22633.2 | 2 | UniProt (Q02539) Pfam (PF00538) | Homo sapiens (human) | Histone H1a |
Sequence modifications
A, E, a, e: 0 - 135 (UniProt: P68431)
B, F, b, f: 0 - 102 (UniProt: P62805)
C, G, c, g: 0 - 129 (UniProt: P04908)
D, H, d, h: 0 - 125 (UniProt: P06899)
K, L, k, l: 1 - 89 (UniProt: O75531)
M, m: 411 - 566 (UniProt: P02545)
N, n: 1 - 215 (UniProt: Q02539)
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
Met 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 409 | - | expression tag |
His 410 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Leu 216 | - | expression tag |
Glu 217 | - | expression tag |
Val 218 | - | expression tag |
Leu 219 | - | expression tag |
Phe 220 | - | expression tag |
Gln 221 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 28 |
Total formula weight | 584913.0 | |
All* | Total formula weight | 584913.0 |