9J4U
Structural basis for recognition of SARS-CoV-2 conserved nucleocapside epitopes by dominant T cell receptors
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | MHC class I antigen | polymer | 276 | 31985.4 | 1 | UniProt (Q8WLS4) Pfam (PF00129) Pfam (PF07654) | Homo sapiens (human) | |
| 2 | B (B) | Beta-2-microglobulin | polymer | 100 | 11879.4 | 1 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (human) | |
| 3 | C (D) | LLL epitope specific TCR APHLA | polymer | 204 | 22631.0 | 1 | Homo sapiens (human) | ||
| 4 | D (E) | LLL epitope specific TCR BETA | polymer | 244 | 27658.6 | 1 | Homo sapiens (human) | ||
| 5 | E (C) | Nucleoprotein | polymer | 9 | 1098.3 | 1 | UniProt (P0DTC9) | Severe acute respiratory syndrome coronavirus 2 | N,Nucleocapsid protein,NC,Protein N |
| 6 | F, G, H, I, J (A, B, D, E, C) | water | water | 18.0 | 252 | Chemie (HOH) |
Sequence modifications
A: 1 - 275 (UniProt: Q8WLS4)
B: 1 - 99 (UniProt: P61769)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 95252.7 | |
| All* | Total formula weight | 95252.7 |
