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9ITG

Cryo-EM structure of human XPR1-E622A/F623A mutant in complex with InsP6 in inward-facing state in the presence of 10 mM KH2PO4

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Solute carrier family 53 member 1polymer70482539.92UniProt (Q9UBH6)
Pfam (PF03105)
Pfam (PF03124)
Homo sapiens (human)Phosphate exporter SLC53A1,Protein SYG1 homolog,Xenotropic and polytropic murine leukemia virus receptor X3,X-receptor,Xenotropic and polytropic retrovirus receptor 1
2C, K
(A, B)
PHOSPHATE IONnon-polymer95.02Chemie (PO4)
3D, L
(A, B)
INOSITOL HEXAKISPHOSPHATEnon-polymer660.02Chemie (IHP)
4E, M
(A, B)
CHOLESTEROLnon-polymer386.72Chemie (CLR)
5F, G, N, O
(A, B)
1,2-Distearoyl-sn-glycerophosphoethanolaminenon-polymer748.14Chemie (3PE)
6H, P
(A, B)
CHOLESTEROL HEMISUCCINATEnon-polymer486.72Chemie (Y01)
7I, Q
(A, B)
PALMITIC ACIDnon-polymer256.42Chemie (PLM)
8J, R
(A, B)
(2S,3R,4E)-3-hydroxy-2-(octanoylamino)octadec-4-en-1-yl dihydrogen phosphatenon-polymer505.72Chemie (1T9)
9S, T
(A, B)
waterwater18.08Chemie (HOH)
Sequence modifications
A, B: 1 - 696 (UniProt: Q9UBH6)
PDBExternal DatabaseDetails
Ala 622Glu 622engineered mutation
Ala 623Phe 623engineered mutation
Ser 697-expression tag
Arg 698-expression tag
Glu 699-expression tag
Asn 700-expression tag
Leu 701-expression tag
Tyr 702-expression tag
Phe 703-expression tag
Gln 704-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight165079.7
Non-Polymers*Number of molecules16
Total formula weight7773.2
All*Total formula weight172852.9
*Water molecules are not included.

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PDB entries from 2025-06-25

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