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9IT4

Structure of Clr4 catalyzing histone H3 K9 methylation

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
Histone-lysine N-methyltransferase, H3 lysine-9 specificpolymer30134078.11UniProt (O60016)
Pfam (PF05033)
Pfam (PF00856)
Schizosaccharomyces pombe 972h-Cryptic loci regulator 4,Histone H3-K9 methyltransferase,H3-K9-HMTase,HKMT,Lysine N-methyltransferase 1,Protein lysine methyltransferase clr4,PKMT
2B
(F)
Histone H3.1/H3.2polymer171807.11UniProt (P09988)Schizosaccharomyces pombe 972h-
3C
(B)
S-ADENOSYLMETHIONINEnon-polymer398.41Chemie (SAM)
4D, E, F, G
(B)
ZINC IONnon-polymer65.44Chemie (ZN)
5H, I
(B, F)
waterwater18.0142Chemie (HOH)
Sequence modifications
B: 191 - 490 (UniProt: O60016)
PDBExternal DatabaseDetails
Gly 190-expression tag
F: 3 - 19 (UniProt: P09988)
PDBExternal DatabaseDetails
Nle 9Lys 10engineered mutation
Cys 14Lys 15engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight35885.1
Non-Polymers*Number of molecules5
Total formula weight660.1
All*Total formula weight36545.2
*Water molecules are not included.

238895

PDB entries from 2025-07-16

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