9IMN
Cryo-EM structure of a TEF30-associated intermediate PSII core dimer complex, type I, from Chlamydomonas reinhardtii
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, R (A, a) | Photosystem II protein D1 | polymer | 327 | 36263.3 | 2 | UniProt (P07753) Pfam (PF00124) | Chlamydomonas reinhardtii | PSII D1 protein,32 kDa thylakoid membrane protein,Photosystem II Q(B) protein |
| 2 | B, S (B, b) | Photosystem II CP47 reaction center protein | polymer | 480 | 52938.3 | 2 | UniProt (P37255) Pfam (PF00421) | Chlamydomonas reinhardtii | PSII 47 kDa protein,Protein CP-47 |
| 3 | C, T (C, c) | Photosystem II CP43 reaction center protein | polymer | 450 | 49473.4 | 2 | UniProt (P10898) Pfam (PF00421) | Chlamydomonas reinhardtii | PSII 43 kDa protein,Protein CP-43,Protein P6 |
| 4 | D, U (D, d) | Photosystem II D2 protein | polymer | 351 | 39342.8 | 2 | UniProt (P06007) Pfam (PF00124) | Chlamydomonas reinhardtii | PSII D2 protein,Photosystem Q(A) protein |
| 5 | E, V (E, e) | Cytochrome b559 subunit alpha | polymer | 75 | 8598.7 | 2 | UniProt (P48268) Pfam (PF00283) Pfam (PF00284) | Chlamydomonas reinhardtii | PSII reaction center subunit V |
| 6 | F, W (F, f) | Cytochrome b559 subunit beta | polymer | 31 | 3535.3 | 2 | UniProt (Q08363) Pfam (PF00283) | Chlamydomonas reinhardtii | PSII reaction center subunit VI |
| 7 | G, X (G, g) | PDZ domain-containing protein | polymer | 240 | 27116.5 | 2 | UniProt (A0A2K3E6S5) Pfam (PF00595) | Chlamydomonas reinhardtii | |
| 8 | H, Y (H, h) | Photosystem II reaction center protein H | polymer | 69 | 7522.9 | 2 | UniProt (P22666) Pfam (PF00737) | Chlamydomonas reinhardtii | PSII-H,Photosystem II 8 kDa phosphoprotein |
| 9 | I, Z (I, i) | Photosystem II reaction center protein I | polymer | 34 | 3902.7 | 2 | UniProt (P59763) Pfam (PF02532) | Chlamydomonas reinhardtii | PSII-I,PSII 4.8 kDa protein |
| 10 | AA, J (K, k) | Photosystem II reaction center protein K | polymer | 37 | 4148.0 | 2 | UniProt (P18263) Pfam (PF02533) | Chlamydomonas reinhardtii | PSII-K |
| 11 | BA, K (L, l) | Photosystem II reaction center protein L | polymer | 38 | 4431.2 | 2 | UniProt (P32974) Pfam (PF02419) | Chlamydomonas reinhardtii | PSII-L |
| 12 | CA, L (M, m) | Photosystem II reaction center protein M | polymer | 27 | 2971.6 | 2 | UniProt (P92277) Pfam (PF05151) | Chlamydomonas reinhardtii | PSII-M |
| 13 | DA, M (T, t) | Photosystem II reaction center protein T | polymer | 31 | 3639.4 | 2 | UniProt (P37256) Pfam (PF01405) | Chlamydomonas reinhardtii | |
| 14 | EA, N (V, v) | Photosystem II reaction center protein Psb30 | polymer | 31 | 3087.8 | 2 | UniProt (P50370) Pfam (PF05969) | Chlamydomonas reinhardtii | Photosystem II reaction center protein Ycf12 |
| 15 | FA, O (W, w) | Photosystem II reaction center W protein, chloroplastic | polymer | 19 | 2192.7 | 2 | UniProt (Q9SPI9) | Chlamydomonas reinhardtii | PSII 6.1 kDa protein |
| 16 | GA, P (X, x) | Chloroplast photosystem II subunit X | polymer | 32 | 3056.6 | 2 | UniProt (A8I846) Pfam (PF06596) | Chlamydomonas reinhardtii | |
| 17 | HA, Q (Z, z) | Photosystem II reaction center protein Z | polymer | 61 | 6466.7 | 2 | UniProt (P92276) Pfam (PF01737) | Chlamydomonas reinhardtii | PSII-Z |
| 18 | IA, YC (A, a) | FE (II) ION | non-polymer | 55.8 | 2 | Chemie (FE2) | |||
| 19 | AB, AC, AD, AF, BB... (B, C, a, d, c...) | CHLOROPHYLL A | non-polymer | 893.5 | 70 | Chemie (CLA) | |||
| 20 | CD, JC, MA, YE (a, D, A, d) | PHEOPHYTIN A | non-polymer | 871.2 | 4 | Chemie (PHO) | |||
| 21 | BC, CC, CF, DC, ED... (C, d, a, B, h...) | BETA-CAROTENE | non-polymer | 536.9 | 20 | Chemie (BCR) | |||
| 22 | CE, HC, HF, JF, KB... (c, C, f, h, B...) | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 10 | Chemie (LMG) | |||
| 23 | AE, EF, FD, FF, GD... (b, d, a, B, l...) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 14 | Chemie (LHG) | |||
| 24 | BE, NB (c, C) | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | non-polymer | 795.1 | 2 | Chemie (SQD) | |||
| 25 | EC, FC, GC, TE, UE... (C, c) | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 6 | Chemie (DGD) | |||
| 26 | IC, XE (C, c) | DODECYL-ALPHA-D-MALTOSIDE | non-polymer | 510.6 | 2 | Chemie (LMU) | |||
| 27 | KC, ZE (D, d) | BICARBONATE ION | non-polymer | 61.0 | 2 | Chemie (BCT) | |||
| 28 | DF, OC (d, D) | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | non-polymer | 749.2 | 2 | Chemie (PL9) | |||
| 29 | GF, RC (e, F) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 2 | Chemie (HEM) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 34 |
| Total formula weight | 517375.6 | |
| Non-Polymers* | Number of molecules | 136 |
| Total formula weight | 106032.0 | |
| All* | Total formula weight | 623407.6 |
