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9IMM

SARS-CoV-2 Replication-Transcription Complex has a dimer architecture (local dRTC) in post-capping state

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
RNA-directed RNA polymerase nsp12polymer932106781.01UniProt (P0DTD1)
Pfam (PF06478)
Pfam (PF00680)
Severe acute respiratory syndrome coronavirus 2Pol,RdRp,Non-structural protein 12,nsp12
2B, D
(B, D)
Non-structural protein 8polymer19821903.02UniProt (P0DTD1)
Pfam (PF08717)
Severe acute respiratory syndrome coronavirus 2nsp8
3C
(C)
Non-structural protein 7polymer839248.81UniProt (P0DTC1)
Pfam (PF08716)
Severe acute respiratory syndrome coronavirus 2nsp7
4E, F
(E, F)
Helicase nsp13polymer60166930.52UniProt (P0DTD1)
Pfam (PF20632)
Pfam (PF20633)
Pfam (PF20631)
Pfam (PF13087)
Severe acute respiratory syndrome coronavirus 2Hel,Non-structural protein 13,nsp13
5G
(G)
Viral protein genome-linked nsp9polymer11312391.21UniProt (P0DTD1)
Pfam (PF08710)
Severe acute respiratory syndrome coronavirus 2Non-structural protein 9,nsp9,RNA-capping enzyme subunit nsp9
6H
(O)
RNA (5'-D(*(ATP))-R(P*UP*UP*AP*AP*AP*GP*GP*UP*U)-3')polymer103346.91Severe acute respiratory syndrome coronavirus 2
7I
(P)
RNA (40-MER)polymer4012875.61Severe acute respiratory syndrome coronavirus 2
8J
(Q)
RNA (5'-R(P*AP*AP*CP*CP*UP*UP*CP*CP*C)-3')polymer92751.71Severe acute respiratory syndrome coronavirus 2
9K
(R)
RNA (59-MER)polymer5918946.21Severe acute respiratory syndrome coronavirus 2
10L, M, N, O, P...
(A, E, F)
ZINC IONnon-polymer65.48Chemie (ZN)
11T, U, V
(A, G, O)
waterwater18.07Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight344008.5
Non-Polymers*Number of molecules8
Total formula weight523.3
All*Total formula weight344531.8
*Water molecules are not included.

240971

PDB entries from 2025-08-27

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