9IMM
SARS-CoV-2 Replication-Transcription Complex has a dimer architecture (local dRTC) in post-capping state
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | RNA-directed RNA polymerase nsp12 | polymer | 932 | 106781.0 | 1 | UniProt (P0DTD1) Pfam (PF06478) Pfam (PF00680) | Severe acute respiratory syndrome coronavirus 2 | Pol,RdRp,Non-structural protein 12,nsp12 |
2 | B, D (B, D) | Non-structural protein 8 | polymer | 198 | 21903.0 | 2 | UniProt (P0DTD1) Pfam (PF08717) | Severe acute respiratory syndrome coronavirus 2 | nsp8 |
3 | C (C) | Non-structural protein 7 | polymer | 83 | 9248.8 | 1 | UniProt (P0DTC1) Pfam (PF08716) | Severe acute respiratory syndrome coronavirus 2 | nsp7 |
4 | E, F (E, F) | Helicase nsp13 | polymer | 601 | 66930.5 | 2 | UniProt (P0DTD1) Pfam (PF20632) Pfam (PF20633) Pfam (PF20631) Pfam (PF13087) | Severe acute respiratory syndrome coronavirus 2 | Hel,Non-structural protein 13,nsp13 |
5 | G (G) | Viral protein genome-linked nsp9 | polymer | 113 | 12391.2 | 1 | UniProt (P0DTD1) Pfam (PF08710) | Severe acute respiratory syndrome coronavirus 2 | Non-structural protein 9,nsp9,RNA-capping enzyme subunit nsp9 |
6 | H (O) | RNA (5'-D(*(ATP))-R(P*UP*UP*AP*AP*AP*GP*GP*UP*U)-3') | polymer | 10 | 3346.9 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
7 | I (P) | RNA (40-MER) | polymer | 40 | 12875.6 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
8 | J (Q) | RNA (5'-R(P*AP*AP*CP*CP*UP*UP*CP*CP*C)-3') | polymer | 9 | 2751.7 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
9 | K (R) | RNA (59-MER) | polymer | 59 | 18946.2 | 1 | Severe acute respiratory syndrome coronavirus 2 | ||
10 | L, M, N, O, P... (A, E, F) | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) | |||
11 | T, U, V (A, G, O) | water | water | 18.0 | 7 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 344008.5 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 523.3 | |
All* | Total formula weight | 344531.8 |