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9IKZ

SARS-CoV-2 E-RTC bound to pRNA-nsp9 and GDP-BeF3-

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
RNA-directed RNA polymerase nsp12polymer931106652.91UniProt (P0DTD1)
Pfam (PF06478)
Pfam (PF00680)
Severe acute respiratory syndrome coronavirus 2Pol,RdRp,Non-structural protein 12,nsp12
2B, D
(B, D)
Non-structural protein 8polymer18720803.82UniProt (P0DTD1)
Pfam (PF08717)
Severe acute respiratory syndrome coronavirus 2nsp8
3C
(C)
Non-structural protein 7polymer788678.11UniProt (P0DTC1)
Pfam (PF08716)
Severe acute respiratory syndrome coronavirus 2nsp7
4E, F
(E, F)
Helicase nsp13polymer59365989.42UniProt (P0DTD1)
Pfam (PF20632)
Pfam (PF20633)
Pfam (PF20631)
Pfam (PF13087)
Severe acute respiratory syndrome coronavirus 2Hel,Non-structural protein 13,nsp13
5G
(G)
Viral protein genome-linked nsp9polymer11312391.21UniProt (P0DTD1)
Pfam (PF08710)
Severe acute respiratory syndrome coronavirus 2Non-structural protein 9,nsp9,RNA-capping enzyme subunit nsp9
6H
(I)
RNA (25-MER)polymer258172.91Severe acute respiratory syndrome coronavirus 2
7I
(J)
RNA (27-MER)polymer278522.11Severe acute respiratory syndrome coronavirus 2
8J, K, O, P, Q...
(A, E, F)
ZINC IONnon-polymer65.48Chemie (ZN)
9L
(A)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
10M
(A)
BERYLLIUM TRIFLUORIDE IONnon-polymer66.01Chemie (BEF)
11N
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight318003.6
Non-Polymers*Number of molecules11
Total formula weight1056.8
All*Total formula weight319060.4
*Water molecules are not included.

247035

PDB entries from 2026-01-07

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