9IJJ
In situ structure of the central apparatus in mouse sperm axoneme.
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, K, PA, QA, RA... (b, a, W, X, Y...) | Spermatogenesis-associated protein 4 | polymer | 295 | 33629.9 | 6 | UniProt (Q8K3V1) Pfam (PF06294) | Mus musculus (house mouse) | Spermatogenesis-related gene 2 protein,Testis and spermatogenesis cell-related protein 2,Testis spermatocyte apoptosis-related gene 2 protein |
| 2 | B, C, D, E, F (c, d, e, f, g) | Kinesin-like protein KIF9 | polymer | 790 | 90023.1 | 5 | UniProt (Q9WV04) Pfam (PF00225) | Mus musculus (house mouse) | |
| 3 | G, H, I (h, i, j) | Cilia- and flagella-associated protein 65 | polymer | 1847 | 209372.4 | 3 | UniProt (Q3V0B4) | Mus musculus (house mouse) | Coiled-coil domain-containing protein 108 |
| 4 | J, L, M, N, V... (k, n, o, p, m...) | Cilia- and flagella-associated protein 70 | polymer | 1141 | 128423.0 | 6 | UniProt (D3YVL2) Pfam (PF13181) | Mus musculus (house mouse) | Tetratricopeptide repeat protein 18,TPR repeat protein 18 |
| 5 | O, P, Q (q, r, s) | Protein FAM228B | polymer | 232 | 27875.2 | 3 | UniProt (Q497Q6) | Mus musculus (house mouse) | |
| 6 | R, S (t, u) | Cilia- and flagella-associated protein 20 | polymer | 193 | 22781.4 | 2 | UniProt (Q8BTU1) Pfam (PF05018) | Mus musculus (house mouse) | Gene trap locus 3 protein |
| 7 | T, U (v, w) | MYCBP-associated protein | polymer | 932 | 106611.9 | 2 | UniProt (Q5SUV2) Pfam (PF14646) | Mus musculus (house mouse) | AMAM-1,AMY-1-binding protein 1,AMAP-1 |
| 8 | W, X (A, B) | Cilia and flagella associated protein 46 | polymer | 2641 | 302995.9 | 2 | UniProt (E9Q2C0) | Mus musculus (house mouse) | |
| 9 | AA, Y, Z (C, D, E) | Cilia- and flagella-associated protein 74 | polymer | 1578 | 179171.1 | 3 | UniProt (Q3UY96) | Mus musculus (house mouse) | |
| 10 | BA, CA (F, G) | Coiled-coil domain containing 180 | polymer | 1664 | 196116.3 | 2 | UniProt (J3QNE4) Pfam (PF14643) Pfam (PF14644) | Mus musculus (house mouse) | |
| 11 | DA, EA (H, I) | Cilia- and flagella-associated protein 54 | polymer | 3106 | 354209.1 | 2 | UniProt (Q8C6S9) Pfam (PF14858) | Mus musculus (house mouse) | |
| 12 | FA (L) | Cilia- and flagella-associated protein 221 | polymer | 836 | 97096.7 | 1 | UniProt (A9Q751) Pfam (PF22544) | Mus musculus (house mouse) | Primary ciliary dyskinesia protein 1 |
| 13 | GA (M) | Leucine rich repeat containing 72 | polymer | 288 | 33759.3 | 1 | UniProt (A0A1Y7VMI0) Pfam (PF14580) | Mus musculus (house mouse) | |
| 14 | HA, IA (O, P) | Deleted in lung and esophageal cancer 1 | polymer | 1741 | 194002.8 | 2 | UniProt (E9Q8C0) | Mus musculus (house mouse) | |
| 15 | JA, KA, LA, MA, NA... (Q, R, S, T, U...) | Sperm-associated antigen 16 protein | polymer | 639 | 71570.8 | 6 | UniProt (Q8K450) Pfam (PF00400) | Mus musculus (house mouse) | Pf20 protein homolog |
| 16 | TA, UA, VA (x, y, z) | Sperm-associated antigen 17 | polymer | 2320 | 263465.5 | 3 | UniProt (Q5S003) Pfam (PF14874) | Mus musculus (house mouse) | Projection protein PF6 homolog |
| 17 | AD, AE, AI, AJ, BB... (Ab, Ad, Af, Ah, Aj...) | Tubulin beta-4B chain | polymer | 445 | 49877.8 | 130 | UniProt (P68372) Pfam (PF00091) Pfam (PF03953) | Mus musculus (house mouse) | Tubulin beta-2C chain |
| 18 | AB, AC, AF, AG, AH... (Ac, Ae, Ag, Ai, Ak...) | Tubulin alpha-3 chain | polymer | 450 | 50012.4 | 130 | UniProt (P05214) Pfam (PF00091) Pfam (PF03953) | Mus musculus (house mouse) | Alpha-tubulin 3/7,Alpha-tubulin isotype M-alpha-3/7,Tubulin alpha-3/alpha-7 chain |
| 19 | AL, BL, CL, DL, EL... (AA, AB, AC, AD, AE...) | Sperm-associated antigen 6 | polymer | 507 | 55329.0 | 27 | UniProt (Q9JLI7) Pfam (PF00514) | Mus musculus (house mouse) | Axoneme central apparatus protein,Protein PF16 homolog |
| 20 | NN, ON, PN, UL, UN... (3D, 3E, 3F, 3G, 3H...) | Calmodulin-1 | polymer | 149 | 16852.5 | 7 | UniProt (P0DP26) Pfam (PF13499) | Mus musculus (house mouse) | |
| 21 | AM, BM, ZL (A2, A3, A4) | Cilia- and flagella-associated protein 69 | polymer | 942 | 106368.6 | 3 | UniProt (Q8BH53) Pfam (PF21049) | Mus musculus (house mouse) | |
| 22 | AN, AQ, BN, BQ, CM... (1A, 1B, 1C, 1D, 1G...) | Sperm acrosome-associated protein 9 | polymer | 168 | 19512.4 | 58 | UniProt (Q7TPM5) Pfam (PF15120) | Mus musculus (house mouse) | Acrosome and sperm tail protein,MAST |
| 23 | FN, GN, HN, IN, JN... (3X, 3Y, 3V, 3W, 3T...) | Protein dpy-30 homolog | polymer | 99 | 11224.6 | 6 | UniProt (Q99LT0) Pfam (PF05186) | Mus musculus (house mouse) | Dpy-30-like protein,Dpy-30L |
| 24 | LN (3A) | Unknown1 | polymer | 57 | 4869.0 | 1 | Mus musculus | ||
| 25 | MN, TN (3B, 3C) | Spermatogenesis-associated protein 17 | polymer | 379 | 45579.2 | 2 | UniProt (Q9D552) Pfam (PF00612) | Mus musculus (house mouse) | Spermatogenesis-related protein 11 |
| 26 | AO, BO, QN, RN, XN... (3K, 3L, 3M, 3N, 3O...) | Cilia- and flagella-associated protein 119 | polymer | 333 | 37912.1 | 6 | UniProt (Q6NZQ0) Pfam (PF14769) | Mus musculus (house mouse) | Coiled-coil domain-containing protein 189 |
| 27 | CO, SN, ZN (3Q, 3R, 3S) | MORN repeat containing 2 | polymer | 152 | 16815.4 | 3 | UniProt (A0A2I3BRK9) Pfam (PF02493) | Mus musculus (house mouse) | |
| 28 | DO, EO (3Z, 3a) | Unknown2 | polymer | 102 | 8698.7 | 2 | Mus musculus | ||
| 29 | FO, GO, HO (3b, 3c, 3d) | Unknown3 | polymer | 143 | 12188.0 | 3 | Mus musculus | ||
| 30 | IO (3e) | Unknown4 | polymer | 54 | 4613.7 | 1 | Mus musculus | ||
| 31 | JO (3f) | Unknown5 | polymer | 18 | 1549.9 | 1 | Mus musculus | ||
| 32 | KO (3g) | Unknown6 | polymer | 47 | 4017.9 | 1 | Mus musculus | ||
| 33 | LO, MO (4A, 4B) | Cilia and flagella-associated protein 47 | polymer | 3184 | 360784.4 | 2 | UniProt (A0A0G2JEB6) Pfam (PF22544) | Mus musculus (house mouse) | |
| 34 | NO, OO, PO, QO, RO (4G, 4H, 4I, 4J, 4K) | Hydrocephalus-inducing protein | polymer | 5154 | 582208.9 | 5 | UniProt (Q80W93) Pfam (PF22544) Pfam (PF14874) Pfam (PF17213) | Mus musculus (house mouse) | Protein Hy-3 |
| 35 | SO, TO, UO, VO (4C, 4D, 4E, 4F) | Germ cell-less protein-like 1 | polymer | 524 | 59723.0 | 4 | UniProt (Q920G9) Pfam (PF00651) Pfam (PF07707) | Mus musculus (house mouse) | mGcl-1,DP-interacting protein,DIP |
| 36 | AP, WO, YO (4M, 4N, 4L) | Sperm flagellar protein 2 | polymer | 1724 | 198248.4 | 3 | UniProt (Q8C9J3) Pfam (PF06294) Pfam (PF22946) Pfam (PF00406) | Mus musculus (house mouse) | Protein KPL2 |
| 37 | BP, XO, ZO (4P, 4Q, 4O) | Leucine-rich repeat and guanylate kinase domain-containing protein | polymer | 820 | 93304.7 | 3 | UniProt (Q9D5S7) Pfam (PF00560) Pfam (PF14580) Pfam (PF00625) | Mus musculus (house mouse) | |
| 38 | CP, DP, EP, FP, GP... (4R, 4S, 4T, 4U, 4V...) | Putative aspartate aminotransferase, cytoplasmic 2 | polymer | 404 | 45505.7 | 6 | UniProt (Q7TSV6) Pfam (PF00155) | Mus musculus (house mouse) | Glutamate oxaloacetate transaminase 1-like protein 1,Transaminase A-like protein 1 |
| 39 | IP, JP (4X, 4Y) | Leucine-rich repeat and death domain-containing protein 1 | polymer | 853 | 97243.8 | 2 | UniProt (Q8C0R9) Pfam (PF13855) Pfam (PF00560) | Mus musculus (house mouse) | |
| 40 | KP (4Z) | G protein-coupled receptor kinase 3 | polymer | 688 | 79774.9 | 1 | UniProt (Q3UYH7) Pfam (PF00615) Pfam (PF00069) Pfam (PF00169) | Mus musculus (house mouse) | Beta-adrenergic receptor kinase 2,Beta-ARK-2 |
| 41 | LP (4a) | Serine/threonine-protein phosphatase PP1-gamma catalytic subunit | polymer | 323 | 37030.8 | 1 | UniProt (P63087) Pfam (PF16891) Pfam (PF00149) | Mus musculus (house mouse) | PP-1G,Protein phosphatase 1C catalytic subunit |
| 42 | IQ, JQ (4b, 4c) | Microtubule-associated protein 1S | polymer | 973 | 103058.2 | 2 | UniProt (Q8C052) | Mus musculus (house mouse) | MAP-1S,BPY2-interacting protein 1,Microtubule-associated protein 8 |
| 43 | RQ, SQ, TQ (J, K, 5A) | Cilia and flagella associated protein 99 | polymer | 648 | 76053.8 | 3 | UniProt (A0A140LIX9) | Mus musculus (house mouse) | |
| 44 | UQ (5B) | Ankyrin repeat and MYND domain-containing protein 1 | polymer | 906 | 102124.5 | 1 | UniProt (Q8C0W1) Pfam (PF02493) Pfam (PF13637) Pfam (PF12796) Pfam (PF01753) | Mus musculus (house mouse) | |
| 45 | VQ (5C) | Leucine-rich repeat-containing protein 43 | polymer | 667 | 75038.5 | 1 | UniProt (Q3V0L5) | Mus musculus (house mouse) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 464 |
| Total formula weight | 28871568.8 | |
| All* | Total formula weight | 28871568.8 |
