9IIU
Cryo-EM structure of an TEF30-associated intermediate PSII core complex from Chlamydomonas reinhardtii
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Photosystem II protein D1 | polymer | 326 | 36192.2 | 1 | UniProt (P07753) Pfam (PF00124) | Chlamydomonas reinhardtii | PSII D1 protein,32 kDa thylakoid membrane protein,Photosystem II Q(B) protein |
| 2 | B (B) | Photosystem II CP47 reaction center protein | polymer | 480 | 52938.3 | 1 | UniProt (P37255) Pfam (PF00421) | Chlamydomonas reinhardtii | PSII 47 kDa protein,Protein CP-47 |
| 3 | C (C) | Photosystem II CP43 reaction center protein | polymer | 450 | 49473.4 | 1 | UniProt (P10898) Pfam (PF00421) | Chlamydomonas reinhardtii | PSII 43 kDa protein,Protein CP-43,Protein P6 |
| 4 | D (D) | Photosystem II D2 protein | polymer | 349 | 39128.6 | 1 | UniProt (P06007) Pfam (PF00124) | Chlamydomonas reinhardtii | PSII D2 protein,Photosystem Q(A) protein |
| 5 | E (E) | Cytochrome b559 subunit alpha | polymer | 75 | 8598.7 | 1 | UniProt (P48268) Pfam (PF00283) Pfam (PF00284) | Chlamydomonas reinhardtii | PSII reaction center subunit V |
| 6 | F (F) | Cytochrome b559 subunit beta | polymer | 31 | 3535.3 | 1 | UniProt (Q08363) Pfam (PF00283) | Chlamydomonas reinhardtii | PSII reaction center subunit VI |
| 7 | G (G) | PDZ domain-containing protein | polymer | 258 | 29196.8 | 1 | UniProt (A0A2K3E6S5) Pfam (PF00595) | Chlamydomonas reinhardtii | |
| 8 | H (H) | Photosystem II reaction center protein H | polymer | 70 | 7652.0 | 1 | UniProt (P22666) Pfam (PF00737) | Chlamydomonas reinhardtii | PSII-H,Photosystem II 8 kDa phosphoprotein |
| 9 | I (I) | Photosystem II reaction center protein I | polymer | 34 | 3902.7 | 1 | UniProt (P59763) Pfam (PF02532) | Chlamydomonas reinhardtii | PSII-I,PSII 4.8 kDa protein |
| 10 | J (J) | Photosystem II reaction center protein J | polymer | 32 | 3270.9 | 1 | UniProt (O19930) Pfam (PF01788) | Chlamydomonas reinhardtii | PSII-J |
| 11 | K (K) | Photosystem II reaction center protein K | polymer | 37 | 4148.0 | 1 | UniProt (P18263) Pfam (PF02533) | Chlamydomonas reinhardtii | PSII-K |
| 12 | L (L) | Photosystem II reaction center protein L | polymer | 35 | 4071.8 | 1 | UniProt (P32974) Pfam (PF02419) | Chlamydomonas reinhardtii | PSII-L |
| 13 | M (M) | Photosystem II reaction center protein M | polymer | 27 | 2971.6 | 1 | UniProt (P92277) Pfam (PF05151) | Chlamydomonas reinhardtii | PSII-M |
| 14 | N (T) | Photosystem II reaction center protein T | polymer | 24 | 2799.4 | 1 | UniProt (P37256) Pfam (PF01405) | Chlamydomonas reinhardtii | PSII-T |
| 15 | O (V) | Photosystem II reaction center protein Psb30 | polymer | 32 | 3201.9 | 1 | UniProt (P50370) Pfam (PF05969) | Chlamydomonas reinhardtii | Photosystem II reaction center protein Ycf12 |
| 16 | P (X) | Chloroplast photosystem II subunit X | polymer | 32 | 3056.6 | 1 | UniProt (A8I846) Pfam (PF06596) | Chlamydomonas reinhardtii | |
| 17 | Q (Z) | Photosystem II reaction center protein Z | polymer | 61 | 6466.7 | 1 | UniProt (P92276) Pfam (PF01737) | Chlamydomonas reinhardtii | PSII-Z |
| 18 | R (A) | FE (II) ION | non-polymer | 55.8 | 1 | Chemie (FE2) | |||
| 19 | AA, AB, BA, BB, CA... (B, C, D, A) | CHLOROPHYLL A | non-polymer | 893.5 | 35 | Chemie (CLA) | |||
| 20 | RB, U (D, A) | PHEOPHYTIN A | non-polymer | 871.2 | 2 | Chemie (PHO) | |||
| 21 | CC, EC, JB, KB, LB... (H, K, C, B, D...) | BETA-CAROTENE | non-polymer | 536.9 | 10 | Chemie (BCR) | |||
| 22 | X (A) | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | non-polymer | 795.1 | 1 | Chemie (SQD) | |||
| 23 | OB, TA, VA, Y, YB (C, B, A, D) | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 5 | Chemie (LMG) | |||
| 24 | AC, FC, UA, XB, Z... (D, L, B, A) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 6 | Chemie (LHG) | |||
| 25 | DC, MB, NB (J, C) | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 3 | Chemie (DGD) | |||
| 26 | PB (C) | DODECYL-ALPHA-D-MALTOSIDE | non-polymer | 510.6 | 1 | Chemie (LMU) | |||
| 27 | SB (D) | BICARBONATE ION | non-polymer | 61.0 | 1 | Chemie (BCT) | |||
| 28 | WB (D) | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | non-polymer | 749.2 | 1 | Chemie (PL9) | |||
| 29 | BC (F) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 1 | Chemie (HEM) | |||
| 30 | GC (A) | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 17 |
| Total formula weight | 260604.8 | |
| Non-Polymers* | Number of molecules | 67 |
| Total formula weight | 52293.0 | |
| All* | Total formula weight | 312897.9 |
