9IAK
Structure of cyclodipeptide synthase from Nocardia brasiliensis (Nbra-CDPS) in complex with RNA microhelices mimicking tRNA-Glu acceptor arm
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Cyclodipeptide synthase | polymer | 248 | 28414.9 | 14 | UniProt (K0F6G5) Pfam (PF16715) | Nocardia brasiliensis ATCC 700358 | |
| 2 | O, P, Q, R, S... (O, P, Q, R, T...) | RNA (5'-R(P*GP*UP*CP*CP*CP*CP*UP*UP*UP*CP*GP*AP*GP*GP*GP*GP*AP*CP*GP*CP*CP*A)-3') | polymer | 22 | 7025.2 | 6 | Escherichia coli | ||
| 3 | AA, BA, CA, DA, EA... (E, F, G, H, I...) | PHOSPHATE ION | non-polymer | 95.0 | 15 | Chemie (PO4) |
Sequence modifications
A, B, C, D, E, F, G, H, I, J, K, L, M, N: 2 - 239 (UniProt: K0F6G5)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| Ala 1 | - | expression tag |
| Arg 240 | - | expression tag |
| Ser 241 | - | expression tag |
| His 242 | - | expression tag |
| His 243 | - | expression tag |
| His 244 | - | expression tag |
| His 245 | - | expression tag |
| His 246 | - | expression tag |
| His 247 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 20 |
| Total formula weight | 439960.2 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1424.6 | |
| All* | Total formula weight | 441384.8 |
