9I83
Cryo-EM structure of PSII intermediate Psb32-PSII
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Photosystem II protein D1 1 | polymer | 360 | 39762.3 | 1 | UniProt (P0A444) Pfam (PF00124) | Thermosynechococcus vestitus BP-1 | PSII D1 protein 1,Photosystem II Q(B) protein 1 |
| 2 | B (B) | Photosystem II CP47 reaction center protein | polymer | 510 | 56656.5 | 1 | UniProt (Q8DIQ1) Pfam (PF00421) | Thermosynechococcus vestitus BP-1 | PSII 47 kDa protein,Protein CP-47 |
| 3 | C (C) | Photosystem II CP43 reaction center protein | polymer | 461 | 50287.5 | 1 | UniProt (Q8DIF8) Pfam (PF00421) | Thermosynechococcus vestitus BP-1 | PSII 43 kDa protein,Protein CP-43 |
| 4 | D (D) | Photosystem II D2 protein | polymer | 352 | 39388.2 | 1 | UniProt (Q8CM25) Pfam (PF00124) | Thermosynechococcus vestitus BP-1 | PSII D2 protein,Photosystem II Q(A) protein |
| 5 | E (E) | Cytochrome b559 subunit alpha | polymer | 84 | 9580.8 | 1 | UniProt (Q8DIP0) Pfam (PF00283) Pfam (PF00284) | Thermosynechococcus vestitus BP-1 | PSII reaction center subunit V |
| 6 | F (F) | Cytochrome b559 subunit beta | polymer | 45 | 5067.9 | 1 | UniProt (Q8DIN9) Pfam (PF00283) | Thermosynechococcus vestitus BP-1 | PSII reaction center subunit VI |
| 7 | G (H) | Photosystem II reaction center protein H | polymer | 66 | 7358.8 | 1 | UniProt (Q8DJ43) Pfam (PF00737) | Thermosynechococcus vestitus BP-1 | PSII-H |
| 8 | H (I) | Photosystem II reaction center protein I | polymer | 38 | 4410.2 | 1 | UniProt (Q8DJZ6) Pfam (PF02532) | Thermosynechococcus vestitus BP-1 | PSII-I,PSII 4.4 kDa protein |
| 9 | I (J) | Photosystem II reaction center protein J | polymer | 40 | 4105.9 | 1 | UniProt (P59087) Pfam (PF01788) | Thermosynechococcus vestitus BP-1 | PSII-J |
| 10 | J (K) | Photosystem II reaction center protein K | polymer | 46 | 5028.1 | 1 | UniProt (Q9F1K9) Pfam (PF02533) | Thermosynechococcus vestitus BP-1 | PSII-K |
| 11 | K (L) | Photosystem II reaction center protein L | polymer | 37 | 4299.0 | 1 | UniProt (Q8DIN8) Pfam (PF02419) | Thermosynechococcus vestitus BP-1 | PSII-L |
| 12 | L (M) | Photosystem II reaction center protein M | polymer | 36 | 3981.7 | 1 | UniProt (Q8DHA7) Pfam (PF05151) | Thermosynechococcus vestitus BP-1 | PSII-M |
| 13 | M (T) | Photosystem II reaction center protein T | polymer | 32 | 3878.7 | 1 | UniProt (Q8DIQ0) Pfam (PF01405) | Thermosynechococcus vestitus BP-1 | PSII-Tc |
| 14 | N (V) | Cytochrome c-550 | polymer | 163 | 18046.9 | 1 | UniProt (P0A386) Pfam (PF14495) | Thermosynechococcus vestitus BP-1 | Cytochrome c-549,Cytochrome c550,Low-potential cytochrome c |
| 15 | O (X) | Photosystem II reaction center X protein | polymer | 41 | 4322.2 | 1 | UniProt (Q9F1R6) Pfam (PF06596) | Thermosynechococcus vestitus BP-1 | |
| 16 | P (Y) | Photosystem II reaction center protein Ycf12 | polymer | 46 | 5039.1 | 1 | UniProt (Q8DJI1) Pfam (PF05969) | Thermosynechococcus vestitus BP-1 | |
| 17 | Q (Z) | Photosystem II reaction center protein Z | polymer | 62 | 6766.2 | 1 | UniProt (Q8DHJ2) Pfam (PF01737) | Thermosynechococcus vestitus BP-1 | PSII-Z |
| 18 | R (1) | Photosystem II lipoprotein Psb27 | polymer | 134 | 15120.4 | 1 | UniProt (Q8DG60) Pfam (PF13326) | Thermosynechococcus vestitus BP-1 | Photosystem II 11 kDa protein |
| 19 | S (3) | Tll0404 protein | polymer | 228 | 24957.1 | 1 | UniProt (Q8DLS4) Pfam (PF04536) | Thermosynechococcus vestitus BP-1 | |
| 20 | T (A) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) PubChem (29936) | |||
| 21 | U (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) PubChem (312) | |||
| 22 | AC, DA, EA, FA, MB... (K, B, C, D, A...) | BETA-CAROTENE | non-polymer | 536.9 | 11 | Chemie (BCR) PubChem (5280489) PubChem (86765360) PubChem (173398668) | |||
| 23 | AB, BB, CB, DB, EB... (C, B, D, A) | CHLOROPHYLL A | non-polymer | 893.5 | 35 | Chemie (CLA) | |||
| 24 | AA, UB (A, D) | PHEOPHYTIN A | non-polymer | 871.2 | 2 | Chemie (PHO) | |||
| 25 | BA, VB (A, D) | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | non-polymer | 749.2 | 2 | Chemie (PL9) | |||
| 26 | CA, WA (A, C) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 2 | Chemie (LHG) | |||
| 27 | BC, CC, DC, FC, NB... (K, L, M, Z, D...) | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 8 | Chemie (LMG) PubChem (446441) | |||
| 28 | OB (D) | BICARBONATE ION | non-polymer | 61.0 | 1 | Chemie (BCT) PubChem (769) | |||
| 29 | EC, WB (V, F) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 2 | Chemie (HEM) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 19 |
| Total formula weight | 308057.6 | |
| Non-Polymers* | Number of molecules | 65 |
| Total formula weight | 49547.0 | |
| All* | Total formula weight | 357604.6 |
