9I3L
Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | Large ribosomal subunit protein bL28 | polymer | 78 | 9027.6 | 1 | UniProt (P0A7M2) | Escherichia coli | 50S ribosomal protein L28 |
| 2 | B (1) | Large ribosomal subunit protein uL29 | polymer | 63 | 7286.5 | 1 | UniProt (P0A7M6) | Escherichia coli | 50S ribosomal protein L29 |
| 3 | C (2) | Large ribosomal subunit protein uL30 | polymer | 59 | 6554.8 | 1 | UniProt (P0AG51) | Escherichia coli | 50S ribosomal protein L30 |
| 4 | D (3) | Large ribosomal subunit protein bL32 | polymer | 57 | 6463.4 | 1 | UniProt (P0A7N4) | Escherichia coli | 50S ribosomal protein L32 |
| 5 | E (4) | Large ribosomal subunit protein bL33 | polymer | 55 | 6388.6 | 1 | UniProt (P0A7N9) | Escherichia coli | 50S ribosomal protein L33 |
| 6 | F (6) | Large ribosomal subunit protein bL34 | polymer | 46 | 5397.5 | 1 | UniProt (P0A7P5) | Escherichia coli | 50S ribosomal protein L34 |
| 7 | G (7) | Large ribosomal subunit protein bL35 | polymer | 65 | 7313.0 | 1 | UniProt (P0A7Q1) | Escherichia coli | 50S ribosomal protein L35,Ribosomal protein A |
| 8 | H (8) | 50S ribosomal protein L36 | polymer | 50 | 5720.1 | 1 | UniProt (A0A2X1PTA3) | Escherichia coli | |
| 9 | I (a) | 5S rRNA | polymer | 120 | 38790.1 | 1 | GenBank (CP035706.1) | Escherichia coli | |
| 10 | J (b) | 23S rRNA | polymer | 2904 | 941620.4 | 1 | GenBank (2065591978) | Escherichia coli | |
| 11 | K (c) | Large ribosomal subunit protein uL2 | polymer | 273 | 29923.6 | 1 | UniProt (P60422) | Escherichia coli | 50S ribosomal protein L2 |
| 12 | L (d) | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) | Escherichia coli | ribosomal protein uL3 |
| 13 | M (e) | Large ribosomal subunit protein uL4 | polymer | 201 | 22121.6 | 1 | UniProt (P60723) | Escherichia coli | 50S ribosomal protein L4 |
| 14 | N (f) | Large ribosomal subunit protein uL5 | polymer | 179 | 20333.6 | 1 | UniProt (P62399) | Escherichia coli | 50S ribosomal protein L5 |
| 15 | O (g) | Large ribosomal subunit protein uL6 | polymer | 177 | 18932.8 | 1 | UniProt (P0AG55) | Escherichia coli | 50S ribosomal protein L6 |
| 16 | P (h) | Large ribosomal subunit protein bL9 | polymer | 149 | 15789.0 | 1 | UniProt (P0A7R1) | Escherichia coli | 50S ribosomal protein L9 |
| 17 | Q (j) | Large ribosomal subunit protein uL13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) | Escherichia coli | 50S ribosomal protein L13 |
| 18 | R (k) | Large ribosomal subunit protein uL14 | polymer | 123 | 13565.1 | 1 | UniProt (P0ADY3) | Escherichia coli | 50S ribosomal protein L14 |
| 19 | S (l) | Large ribosomal subunit protein uL15 | polymer | 144 | 15008.5 | 1 | UniProt (P02413) | Escherichia coli | 50S ribosomal protein L15 |
| 20 | T (m) | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 1 | UniProt (P0ADY7) | Escherichia coli | ribosomal protein uL16 |
| 21 | U (n) | Large ribosomal subunit protein bL17 | polymer | 127 | 14393.7 | 1 | UniProt (P0AG44) | Escherichia coli | 50S ribosomal protein L17 |
| 22 | V (o) | Large ribosomal subunit protein uL18 | polymer | 117 | 12794.7 | 1 | UniProt (P0C018) | Escherichia coli | 50S ribosomal protein L18 |
| 23 | W (p) | Large ribosomal subunit protein bL19 | polymer | 115 | 13159.3 | 1 | UniProt (P0A7K6) | Escherichia coli | 50S ribosomal protein L19 |
| 24 | X (q) | Large ribosomal subunit protein bL20 | polymer | 118 | 13528.0 | 1 | UniProt (P0A7L3) | Escherichia coli | 50S ribosomal protein L20 |
| 25 | Y (r) | Large ribosomal subunit protein bL21 | polymer | 103 | 11586.4 | 1 | UniProt (P0AG48) | Escherichia coli | 50S ribosomal protein L21 |
| 26 | Z (s) | Large ribosomal subunit protein uL22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) | Escherichia coli | 50S ribosomal protein L22 |
| 27 | AA (t) | Large ribosomal subunit protein uL23 | polymer | 100 | 11222.2 | 1 | UniProt (P0ADZ0) | Escherichia coli | 50S ribosomal protein L23 |
| 28 | BA (u) | Large ribosomal subunit protein uL24 | polymer | 104 | 11339.3 | 1 | UniProt (P60624) | Escherichia coli | 50S ribosomal protein L24 |
| 29 | CA (w) | Large ribosomal subunit protein bL25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) | Escherichia coli | 50S ribosomal protein L25 |
| 30 | DA (y) | Large ribosomal subunit protein bL27 | polymer | 85 | 9146.5 | 1 | UniProt (P0A7L8) | Escherichia coli | 50S ribosomal protein L27 |
| 31 | EA (z) | Gelation factor | polymer | 160 | 17003.7 | 1 | UniProt (P13466) | Dictyostelium discoideum | Actin-binding protein 120,ABP-120 |
| 32 | FA (Z) | Peptidyl Gly-tRNA | polymer | 76 | 24478.5 | 1 | GenBank (1851733809) | Escherichia coli |
Sequence modifications
z: 646 - 778 (UniProt: P13466)
| PDB | External Database | Details |
|---|---|---|
| Met 637 | - | initiating methionine |
| His 638 | - | expression tag |
| His 639 | - | expression tag |
| His 640 | - | expression tag |
| His 641 | - | expression tag |
| His 642 | - | expression tag |
| His 643 | - | expression tag |
| Ala 644 | - | expression tag |
| Ser 645 | - | expression tag |
| Glu 719 | Tyr 719 | conflict |
| Glu 779 | - | expression tag |
| Leu 780 | - | expression tag |
| Phe 781 | - | expression tag |
| Ser 782 | - | expression tag |
| Thr 783 | - | expression tag |
| Pro 784 | - | expression tag |
| Val 785 | - | expression tag |
| Trp 786 | - | expression tag |
| Ile 787 | - | expression tag |
| Ser 788 | - | expression tag |
| Gln 789 | - | expression tag |
| Ala 790 | - | expression tag |
| Gln 791 | - | expression tag |
| Gly 792 | - | expression tag |
| Ile 793 | - | expression tag |
| Arg 794 | - | expression tag |
| Ala 795 | - | expression tag |
| Gly 796 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 32 |
| Total formula weight | 1385495.5 | |
| All* | Total formula weight | 1385495.5 |
