9HIG
Cryo-EM composite structure of 70S ribosome of marine cold bacterium Pseudoalteromonas translucida (P. haloplanktis)TAC125.
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 16S rRNA | polymer | 1528 | 494937.2 | 1 | GenBank (76873893) | Pseudoalteromonas translucida TAC125 | |
| 2 | B (B) | Small ribosomal subunit protein uS2 | polymer | 242 | 26878.7 | 1 | UniProt (Q3IIX4) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S2 |
| 3 | C (C) | Small ribosomal subunit protein uS3 | polymer | 233 | 25780.2 | 1 | UniProt (Q3IF19) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S3 |
| 4 | D (D) | Small ribosomal subunit protein uS4 | polymer | 206 | 23525.2 | 1 | UniProt (Q3IJJ5) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S4 |
| 5 | E (E) | Small ribosomal subunit protein uS5 | polymer | 168 | 17735.5 | 1 | UniProt (Q3IJK2) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S5 |
| 6 | F (F) | Small ribosomal subunit protein bS6 | polymer | 113 | 13013.8 | 1 | UniProt (Q3IIA2) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S6 |
| 7 | G (G) | Small ribosomal subunit protein uS7 | polymer | 156 | 17627.5 | 1 | UniProt (Q3ILP6) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S7 |
| 8 | H (H) | Small ribosomal subunit protein uS8 | polymer | 130 | 14082.5 | 1 | UniProt (Q3IJJ9) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S8 |
| 9 | I (I) | Small ribosomal subunit protein uS9 | polymer | 129 | 14639.0 | 1 | UniProt (Q3IG27) | Pseudoalteromonas translucida TAC125 | |
| 10 | J (J) | Small ribosomal subunit protein uS10 | polymer | 103 | 11752.5 | 1 | UniProt (Q3IF26) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S10 |
| 11 | K (K) | Small ribosomal subunit protein uS11 | polymer | 128 | 13718.7 | 1 | UniProt (Q3IJK7) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S11 |
| 12 | L (L) | Small ribosomal subunit protein uS12 | polymer | 124 | 13700.0 | 1 | UniProt (Q3ILP7) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S12 |
| 13 | M (M) | Small ribosomal subunit protein uS13 | polymer | 118 | 13142.4 | 1 | UniProt (Q3IJK6) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S13 |
| 14 | N (N) | Small ribosomal subunit protein uS14 | polymer | 101 | 11518.5 | 1 | UniProt (Q3IJJ8) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S14 |
| 15 | O (O) | Small ribosomal subunit protein uS15 | polymer | 89 | 10296.9 | 1 | UniProt (Q3IJ74) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S15 |
| 16 | P (P) | Small ribosomal subunit protein bS16 | polymer | 82 | 9271.8 | 1 | UniProt (Q3IEC9) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S16 |
| 17 | Q (Q) | Small ribosomal subunit protein uS17 | polymer | 85 | 9789.4 | 1 | UniProt (Q3IFM3) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S17 |
| 18 | R (R) | Small ribosomal subunit protein bS18 | polymer | 75 | 8861.4 | 1 | UniProt (Q3II81) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S18 |
| 19 | S (S) | Small ribosomal subunit protein uS19 | polymer | 96 | 10969.8 | 1 | UniProt (Q3IF21) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S19 |
| 20 | T (T) | Small ribosomal subunit protein bS20 | polymer | 86 | 9659.4 | 1 | UniProt (Q3IEA5) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S20 |
| 21 | U (U) | Small ribosomal subunit protein bS21 | polymer | 71 | 8589.2 | 1 | UniProt (Q3IIB6) | Pseudoalteromonas translucida TAC125 | 30S ribosomal protein S21 |
| 22 | V (W) | P-site tRNA-fMet | polymer | 18 | 5771.5 | 1 | Pseudoalteromonas translucida TAC125 | ||
| 23 | W (X) | mRNA | polymer | 4 | 1264.8 | 1 | Pseudoalteromonas translucida TAC125 | ||
| 24 | X (a) | 23S rRNA | polymer | 2889 | 935834.4 | 1 | GenBank (76873893) | Pseudoalteromonas translucida TAC125 | |
| 25 | Y (b) | 5S rRNA | polymer | 117 | 37681.4 | 1 | GenBank (507148480) | Pseudoalteromonas translucida TAC125 | |
| 26 | Z (0) | Large ribosomal subunit protein bL33 | polymer | 51 | 6131.4 | 1 | UniProt (Q3IFE7) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L33 |
| 27 | AA (1) | Large ribosomal subunit protein bL34 | polymer | 44 | 5109.2 | 1 | UniProt (Q3IK51) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L34 |
| 28 | BA (2) | Large ribosomal subunit protein bL35 | polymer | 66 | 7717.4 | 1 | UniProt (Q3IL79) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L35 |
| 29 | CA (3) | Large ribosomal subunit protein bL36 | polymer | 44 | 5006.2 | 1 | UniProt (Q3IC33) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L36 |
| 30 | DA (c) | Large ribosomal subunit protein uL2 | polymer | 274 | 29956.6 | 1 | UniProt (Q3IF22) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L2 |
| 31 | EA (d) | Large ribosomal subunit protein uL3 | polymer | 211 | 22214.3 | 1 | UniProt (Q3IF25) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L3 |
| 32 | FA (e) | Large ribosomal subunit protein uL4 | polymer | 201 | 21862.2 | 1 | UniProt (Q3IF24) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L4 |
| 33 | GA (g) | Large ribosomal subunit protein uL6 | polymer | 177 | 19233.1 | 1 | UniProt (Q3IJK0) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L6 |
| 34 | HA (h) | Large ribosomal subunit protein bL9 | polymer | 150 | 15745.0 | 1 | UniProt (Q3II82) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L9 |
| 35 | IA (i) | Large ribosomal subunit protein uL13 | polymer | 142 | 15972.6 | 1 | UniProt (Q3IG26) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L13 |
| 36 | JA (j) | Large ribosomal subunit protein uL14 | polymer | 122 | 13443.8 | 1 | UniProt (Q3IJL9) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L14 |
| 37 | KA (k) | Large ribosomal subunit protein uL15 | polymer | 144 | 15012.5 | 1 | UniProt (Q3IJK4) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L15 |
| 38 | LA (l) | Large ribosomal subunit protein uL16 | polymer | 137 | 15694.5 | 1 | UniProt (Q3IF18) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L16 |
| 39 | MA (m) | Large ribosomal subunit protein bL17 | polymer | 133 | 14875.1 | 1 | UniProt (Q3IJI7) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L17 |
| 40 | NA (n) | Large ribosomal subunit protein uL18 | polymer | 116 | 12633.6 | 1 | UniProt (Q3IJK1) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L18 |
| 41 | OA (o) | Large ribosomal subunit protein bL19 | polymer | 119 | 13356.5 | 1 | UniProt (Q3IEC6) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L19 |
| 42 | PA (p) | Large ribosomal subunit protein bL20 | polymer | 120 | 13593.9 | 1 | UniProt (Q3IL78) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L20 |
| 43 | QA (q) | Large ribosomal subunit protein bL21 | polymer | 103 | 11513.3 | 1 | UniProt (Q3IFF4) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L21 |
| 44 | RA (r) | Large ribosomal subunit protein uL22 | polymer | 110 | 12056.1 | 1 | UniProt (Q3IF20) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L22 |
| 45 | SA (s) | Large ribosomal subunit protein uL23 | polymer | 100 | 11154.9 | 1 | UniProt (Q3IF23) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L23 |
| 46 | TA (t) | Large ribosomal subunit protein uL24 | polymer | 104 | 11411.3 | 1 | UniProt (Q3IJJ6) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L24 |
| 47 | UA (u) | Large ribosomal subunit protein bL25 | polymer | 204 | 22372.3 | 1 | UniProt (Q3IK85) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L25,General stress protein CTC |
| 48 | VA (v) | Large ribosomal subunit protein bL27 | polymer | 85 | 9270.6 | 1 | UniProt (Q3IFF5) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L27 |
| 49 | WA (w) | Large ribosomal subunit protein bL28 | polymer | 95 | 11106.2 | 1 | UniProt (Q3IFE6) | Pseudoalteromonas translucida TAC125 | |
| 50 | XA (x) | Large ribosomal subunit protein uL29 | polymer | 63 | 7195.3 | 1 | UniProt (Q3IFM4) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L29 |
| 51 | YA (y) | Large ribosomal subunit protein uL30 | polymer | 60 | 6675.9 | 1 | UniProt (Q3IJK3) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L30 |
| 52 | ZA (z) | Large ribosomal subunit protein bL32 | polymer | 56 | 6280.1 | 1 | UniProt (Q3IHD7) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L32 |
| 53 | AB (f) | Large ribosomal subunit protein uL5 | polymer | 179 | 20126.4 | 1 | UniProt (Q3IJJ7) | Pseudoalteromonas translucida TAC125 | 50S ribosomal protein L5 |
| 54 | AC, AD, AE, AF, AG... (A, a, c, d, e...) | MAGNESIUM ION | non-polymer | 24.3 | 289 | Chemie (MG) PubChem (888) | |||
| 55 | EM, FM, GM, HM, IM (A, a, c, m, z) | water | water | 18.0 | 27 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 53 |
| Total formula weight | 2136761.9 | |
| Non-Polymers* | Number of molecules | 289 |
| Total formula weight | 7024.1 | |
| All* | Total formula weight | 2143786.0 |
