9HFK
Cryo-EM structure of the freshwater actinorhodopsin, Rhodoluna lacicola (RlActR)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (A, E, C, B, D) | Bacteriorhodopsin | polymer | 272 | 30087.2 | 5 | UniProt (C0K2L3) | Rhodoluna lacicola | Putative actinorhodopsin, Actinorhodopsin |
| 2 | F, J, N, R, V (A, E, C, B, D) | [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-dodecanoyloxy-propan-2-yl]-tridecnoate | non-polymer | 593.8 | 5 | Chemie (A1INB) | |||
| 3 | G, K, O, S, W (A, E, C, B, D) | [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-dodecanoyloxy-propan-2-yl] octadecanoate | non-polymer | 663.9 | 5 | Chemie (A1IVO) | |||
| 4 | H, L, P, T, X (A, E, C, B, D) | [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-nonanoyloxy-propan-2-yl] (~{E})-octadec-9-enoate | non-polymer | 619.8 | 5 | Chemie (A1INC) | |||
| 5 | I, M, Q, U, Y (A, E, C, B, D) | RETINAL | non-polymer | 284.4 | 5 | Chemie (RET) PubChem (23254473) PubChem (177675058) PubChem (5280490) PubChem (5381765) PubChem (87082476) PubChem (87110449) PubChem (87110609) PubChem (88398773) PubChem (88407543) PubChem (1070) PubChem (638015) PubChem (5353924) PubChem (6436079) PubChem (6436082) PubChem (11426127) PubChem (12227253) PubChem (12227254) PubChem (12227256) PubChem (12227257) PubChem (12227258) PubChem (12227259) PubChem (12227269) PubChem (12227270) PubChem (12227271) PubChem (134688327) PubChem (140510408) PubChem (145826762) PubChem (169423542) PubChem (172878320) |
Sequence modifications
A, E, C, B, D: 1 - 264 (UniProt: C0K2L3)
| PDB | External Database | Details |
|---|---|---|
| Leu 265 | - | expression tag |
| Glu 266 | - | expression tag |
| Gly 267 | - | expression tag |
| His 268 | - | expression tag |
| His 269 | - | expression tag |
| His 270 | - | expression tag |
| His 271 | - | expression tag |
| His 272 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 150435.8 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 10809.6 | |
| All* | Total formula weight | 161245.5 |
