9HED
Unspecific peroxygenase from Psathyrella aberdarensis (PabUPO-II) in complex with alpha-damascone
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Heme-thiolate peroxidase | polymer | 335 | 36630.4 | 3 | UniProt (A0A4V1Q376) Pfam (PF01328) | Candolleomyces aberdarensis (basidiomycete fungi) | |
| 2 | D, F (H, Y) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 2 | In PDB GlyTouCan (G22768VO) | |||
| 3 | E (J) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 1 | In PDB GlyTouCan (G55220VL) | |||
| 4 | G (Z) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G09724ZC) | |||
| 5 | H (m) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 6 | I (n) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 7 | CA, J, T (C, A, B) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 3 | Chemie (HEM) | |||
| 8 | EA, FA, GA, K, L (C, A) | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | non-polymer | 238.3 | 5 | Chemie (EPE) | |||
| 9 | HA, M, U (C, A, B) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 10 | DA, N, V (C, A, B) | alpha-damascone | non-polymer | 192.3 | 3 | Chemie (A1IUA) | |||
| 11 | IA, O, W (C, A, B) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
| 12 | AA, BA, P, Q, R... (B, A) | SULFATE ION | non-polymer | 96.1 | 9 | Chemie (SO4) | |||
| 13 | JA, KA, LA (A, B, C) | water | water | 18.0 | 310 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 109891.3 | |
| Branched | Number of molecules | 6 |
| Total formula weight | 5464.9 | |
| Non-Polymers* | Number of molecules | 26 |
| Total formula weight | 4831.6 | |
| All* | Total formula weight | 120187.9 |
