9HC4
Cryo-EM structure of P. urativorans 70S ribosome with 2 copies of bS20.
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (F) | Small ribosomal subunit protein uS9 | polymer | 128 | 14278.5 | 1 | UniProt (A0A0M4T6M9) Pfam (PF00380) UniProt (by SIFTS) (Q4FRE4) | Psychrobacter urativorans | |
| 2 | B (C1) | Large ribosomal subunit protein bL9 | polymer | 166 | 18195.2 | 1 | UniProt (A0A0M3V9E8) Pfam (PF01281) Pfam (PF03948) UniProt (by SIFTS) (Q4FS19) | Psychrobacter urativorans | |
| 3 | C (R3) | Small ribosomal subunit protein bS18 | polymer | 76 | 8973.3 | 1 | UniProt (A0A0M5MK69) Pfam (PF01084) UniProt (by SIFTS) (Q4FS20) | Psychrobacter urativorans | |
| 4 | D (A4) | Small ribosomal subunit protein uS2 | polymer | 269 | 29465.5 | 1 | UniProt (A0A0M4TFJ4) Pfam (PF00318) UniProt (by SIFTS) (Q4FUT9) | Psychrobacter urativorans | |
| 5 | E (E5) | Small ribosomal subunit protein uS5 | polymer | 171 | 18192.9 | 1 | UniProt (A0A0M3V8J0) Pfam (PF00333) Pfam (PF03719) UniProt (by SIFTS) (Q4FUD9) | Psychrobacter urativorans | |
| 6 | F (L6) | Small ribosomal subunit protein uS12 | polymer | 124 | 13753.1 | 1 | UniProt (A0A0M4U4C3) Pfam (PF00164) | Psychrobacter urativorans | |
| 7 | G (F7) | Large ribosomal subunit protein uL5 | polymer | 178 | 19841.2 | 1 | UniProt (A0A0M4T1L5) Pfam (PF00281) Pfam (PF00673) UniProt (by SIFTS) (Q4FUE4) | Psychrobacter urativorans | |
| 8 | H (E9) | Large ribosomal subunit protein uL4 | polymer | 200 | 21971.3 | 1 | UniProt (A0A0M4U627) Pfam (PF00573) | Psychrobacter urativorans | |
| 9 | I (aA) | Large ribosomal subunit protein bL32 | polymer | 60 | 7169.2 | 1 | UniProt (A0A0M4SWQ6) Pfam (PF01783) UniProt (by SIFTS) (Q4FUC6) | Psychrobacter urativorans | |
| 10 | J (MB) | Large ribosomal subunit protein bL17 | polymer | 119 | 13635.9 | 1 | UniProt (A0A0M4U611) Pfam (PF01196) UniProt (by SIFTS) (Q4FUD0) | Psychrobacter urativorans | |
| 11 | K (UC) | Large ribosomal subunit protein bL25 | polymer | 219 | 23887.2 | 1 | UniProt (A0A0M4U726) Pfam (PF01386) Pfam (PF14693) UniProt (by SIFTS) (Q4FVB4) | Psychrobacter urativorans | General stress protein CTC |
| 12 | L (WD) | Large ribosomal subunit protein bL28 | polymer | 78 | 9168.8 | 1 | UniProt (A0A0M4T6Y7) Pfam (PF00830) UniProt (by SIFTS) (Q4FR00) | Psychrobacter urativorans | |
| 13 | M (XE) | Large ribosomal subunit protein uL29 | polymer | 65 | 7519.6 | 1 | UniProt (A0A0M4TBX9) Pfam (PF00831) UniProt (by SIFTS) (Q4FUE8) | Psychrobacter urativorans | |
| 14 | N (RF) | Large ribosomal subunit protein uL22 | polymer | 109 | 11933.0 | 1 | UniProt (A0A0M4SWS6) Pfam (PF00237) UniProt (by SIFTS) (Q4FUF1) | Psychrobacter urativorans | |
| 15 | O (FG) | Small ribosomal subunit protein bS6 | polymer | 134 | 15839.6 | 1 | UniProt (A0A0M4U628) Pfam (PF01250) UniProt (by SIFTS) (Q4FS21) | Psychrobacter urativorans | |
| 16 | P (VH) | Large ribosomal subunit protein bL27 | polymer | 85 | 9119.5 | 1 | UniProt (A0A0M4TUE5) Pfam (PF01016) UniProt (by SIFTS) (Q4FRD8) | Psychrobacter urativorans | |
| 17 | Q (TI) | Large ribosomal subunit protein uL24 | polymer | 105 | 11465.1 | 1 | UniProt (A0A0M4TE60) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (Q4FUE5) | Psychrobacter urativorans | |
| 18 | R (fJ) | Large ribosomal subunit protein bL31B | polymer | 93 | 10708.7 | 1 | UniProt (A0A0M4SX87) Pfam (PF01197) UniProt (by SIFTS) (Q4FQE4) | Psychrobacter urativorans | |
| 19 | S (HK) | Small ribosomal subunit protein uS14 | polymer | 101 | 11777.8 | 1 | UniProt (A0A0M3V8P8) Pfam (PF00253) UniProt (by SIFTS) (Q4FUE3) | Psychrobacter urativorans | |
| 20 | T (OL) | Small ribosomal subunit protein uS15 | polymer | 88 | 10218.7 | 1 | UniProt (A0A0M4TF29) Pfam (PF00312) UniProt (by SIFTS) (Q4FVL1) | Psychrobacter urativorans | |
| 21 | U (MM) | Small ribosomal subunit protein uS13 | polymer | 118 | 13244.4 | 1 | UniProt (A0A0M5MJL8) Pfam (PF00416) UniProt (by SIFTS) (Q4FUD4) | Psychrobacter urativorans | |
| 22 | V (PO) | Large ribosomal subunit protein bL20 | polymer | 118 | 13540.0 | 1 | UniProt (A0A0M5MJR6) Pfam (PF00453) UniProt (by SIFTS) (Q4FQ64) | Psychrobacter urativorans | |
| 23 | W (SP) | Small ribosomal subunit protein uS19 | polymer | 91 | 10336.2 | 1 | UniProt (A0A0M4TUJ8) Pfam (PF00203) UniProt (by SIFTS) (Q4FUF2) | Psychrobacter urativorans | |
| 24 | X (BQ) | Small ribosomal subunit protein uS8 | polymer | 132 | 14086.3 | 1 | UniProt (A0A0M4U618) Pfam (PF00410) UniProt (by SIFTS) (Q4FUE2) | Psychrobacter urativorans | |
| 25 | Y (GR) | Large ribosomal subunit protein uL6 | polymer | 177 | 19536.3 | 1 | UniProt (A0A0M5MKV2) Pfam (PF00347) UniProt (by SIFTS) (Q4FUE1) | Psychrobacter urativorans | |
| 26 | Z (GS) | Small ribosomal subunit protein uS7 | polymer | 157 | 17760.6 | 1 | UniProt (A0A0M3V8N5) Pfam (PF00177) UniProt (by SIFTS) (Q4FQG4) | Psychrobacter urativorans | |
| 27 | AA (CT) | Small ribosomal subunit protein uS3 | polymer | 241 | 27120.3 | 1 | UniProt (A0A0M4T6V9) Pfam (PF07650) Pfam (PF00189) UniProt (by SIFTS) (Q4FUF0) | Psychrobacter urativorans | |
| 28 | BA (KU) | Small ribosomal subunit protein uS11 | polymer | 129 | 13676.6 | 1 | UniProt (A0A0M3V8P6) Pfam (PF00411) UniProt (by SIFTS) (Q4FUD3) | Psychrobacter urativorans | |
| 29 | CA (NV) | Small ribosomal subunit protein bS21 | polymer | 71 | 8548.2 | 1 | UniProt (A0A0M4SY21) Pfam (PF01165) UniProt (by SIFTS) (Q4FV74) | Psychrobacter urativorans | |
| 30 | DA (YW) | Large ribosomal subunit protein uL30 | polymer | 59 | 6615.8 | 1 | UniProt (A0A0M4SWR7) Pfam (PF00327) UniProt (by SIFTS) (Q4FUD8) | Psychrobacter urativorans | |
| 31 | EA (IX) | Large ribosomal subunit protein uL13 | polymer | 142 | 15802.3 | 1 | UniProt (A0A0M4TBP4) Pfam (PF00572) UniProt (by SIFTS) (Q4FRE5) | Psychrobacter urativorans | |
| 32 | FA (JY) | Small ribosomal subunit protein uS10 | polymer | 103 | 11635.4 | 1 | UniProt (A0A0M4TE68) Pfam (PF00338) UniProt (by SIFTS) (Q4FUF7) | Psychrobacter urativorans | |
| 33 | GA (QZ) | Small ribosomal subunit protein uS17 | polymer | 91 | 10363.0 | 1 | UniProt (A0A0M4U401) Pfam (PF00366) UniProt (by SIFTS) (Q4FUE7) | Psychrobacter urativorans | |
| 34 | HA (Ba) | Large ribosomal subunit protein bL34 | polymer | 44 | 5292.5 | 1 | UniProt (A0A0M4TEZ6) Pfam (PF00468) UniProt (by SIFTS) (Q4FPR4) | Psychrobacter urativorans | |
| 35 | IA (Qb) | Large ribosomal subunit protein bL21 | polymer | 103 | 11773.7 | 1 | UniProt (A0A0M5TIS3) Pfam (PF00829) UniProt (by SIFTS) (Q4FRD7) | Psychrobacter urativorans | |
| 36 | JA (Nc) | Large ribosomal subunit protein uL18 | polymer | 116 | 12550.4 | 1 | UniProt (A0A0M4TUJ2) Pfam (PF00861) UniProt (by SIFTS) (Q4FUE0) | Psychrobacter urativorans | |
| 37 | KA (Kd) | Large ribosomal subunit protein uL15 | polymer | 146 | 15448.9 | 1 | UniProt (A0A0M4T6V1) Pfam (PF00828) UniProt (by SIFTS) (Q4FUD7) | Psychrobacter urativorans | |
| 38 | LA (Je) | Large ribosomal subunit protein uL14 | polymer | 122 | 13417.8 | 1 | UniProt (A0A0M5MJS2) Pfam (PF00238) UniProt (by SIFTS) (Q4FUE6) | Psychrobacter urativorans | |
| 39 | MA (Af) | Large ribosomal subunit protein uL3 | polymer | 212 | 22236.3 | 1 | UniProt (A0A0M4T1M3) Pfam (PF00297) UniProt (by SIFTS) (Q4FUF6) | Psychrobacter urativorans | |
| 40 | NA (Lg) | Large ribosomal subunit protein uL16 | polymer | 137 | 15626.7 | 1 | UniProt (A0A0M3V8J3) Pfam (PF00252) UniProt (by SIFTS) (Q4FUE9) | Psychrobacter urativorans | |
| 41 | OA (dh) | Large ribosomal subunit protein bL35 | polymer | 65 | 7594.3 | 1 | UniProt (A0A0M4U4I0) Pfam (PF01632) UniProt (by SIFTS) (Q4FQ63) | Psychrobacter urativorans | |
| 42 | PA (Oi) | Large ribosomal subunit protein bL19 | polymer | 130 | 14598.0 | 1 | UniProt (A0A0M4TV08) Pfam (PF01245) UniProt (by SIFTS) (Q4FQ45) | Psychrobacter urativorans | |
| 43 | QA (Pj) | Small ribosomal subunit protein bS16 | polymer | 89 | 9955.4 | 1 | UniProt (A0A0M4T275) Pfam (PF00886) UniProt (by SIFTS) (Q4FQ42) | Psychrobacter urativorans | |
| 44 | RA (bk) | Large ribosomal subunit protein bL33 | polymer | 51 | 6053.3 | 1 | UniProt (A0A0M4SWV1) Pfam (PF00471) | Psychrobacter urativorans | |
| 45 | SA (Cl) | Large ribosomal subunit protein uL2 | polymer | 274 | 30263.1 | 1 | UniProt (A0A0M3V8Q0) Pfam (PF00181) Pfam (PF03947) UniProt (by SIFTS) (Q4FUF3) | Psychrobacter urativorans | |
| 46 | TA (Dm) | Small ribosomal subunit protein uS4 | polymer | 213 | 24279.0 | 1 | UniProt (A0A0M4TE52) Pfam (PF00163) Pfam (PF01479) UniProt (by SIFTS) (Q4FUD2) | Psychrobacter urativorans | |
| 47 | UA (Sn) | Large ribosomal subunit protein uL23 | polymer | 116 | 12816.6 | 1 | UniProt (A0A0M5MJH9) Pfam (PF00276) UniProt (by SIFTS) (Q4FUF4) | Psychrobacter urativorans | |
| 48 | VA, XA (To, A) | Small ribosomal subunit protein bS20 | polymer | 88 | 9980.6 | 2 | UniProt (A0A0M4T3R2) Pfam (PF01649) UniProt (by SIFTS) (Q4FRM3) | Psychrobacter urativorans | |
| 49 | WA (ep) | Large ribosomal subunit protein bL36 | polymer | 38 | 4330.3 | 1 | UniProt (A0A0M4U3Z5) Pfam (PF00444) UniProt (by SIFTS) (Q4FUD5) | Psychrobacter urativorans | |
| 50 | YA (D8) | 5S rRNA | polymer | 115 | 36948.9 | 1 | GenBank (930356181) | Psychrobacter urativorans | |
| 51 | ZA (iN) | 16S rRNA | polymer | 1589 | 514644.5 | 1 | Psychrobacter urativorans | ||
| 52 | AB (Z2) | 23S rRNA | polymer | 2882 | 933563.1 | 1 | GenBank (930356181) | Psychrobacter urativorans |
Sequence modifications
D8: 1 - 115 (GenBank: 930356181)
Z2: 1 - 2882 (GenBank: 930356181)
| PDB | External Database | Details |
|---|---|---|
| U 85 | - | insertion |
| A 88 | C 827435 | variant |
| PDB | External Database | Details |
|---|---|---|
| U 1717 | G 828860 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 53 |
| Total formula weight | 2180733.7 | |
| All* | Total formula weight | 2180733.7 |
