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9H4N

RPL13 (eL13)-mutant 80S ribosome from mouse

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A1)
Large ribosomal subunit protein uL30polymer22226199.31UniProt (P14148)
Pfam (PF08079)
Pfam (PF00327)
Mus musculus (house mouse)60S ribosomal protein L7
2B
(B1)
Large ribosomal subunit protein eL8polymer23226491.31UniProt (P12970)
Pfam (PF01248)
Mus musculus (house mouse)60S ribosomal protein L7a,Surfeit locus protein 3
3C
(C1)
Large ribosomal subunit protein uL6polymer19021673.31UniProt (P51410)
Pfam (PF00347)
Mus musculus (house mouse)60S ribosomal protein L9
4D
(D1)
Large ribosomal subunit protein uL16-likepolymer21324480.81UniProt (P86048)
Pfam (PF00252)
Mus musculus (house mouse)60S ribosomal protein L10-like
5E
(E1)
Large ribosomal subunit protein uL5polymer17419900.01UniProt (Q9CXW4)
Pfam (PF00281)
Pfam (PF00673)
Mus musculus (house mouse)60S ribosomal protein L11
6F
(F1)
Large ribosomal subunit protein eL13polymer20323374.51UniProt (P47963)
Pfam (PF01294)
Mus musculus (house mouse)60S ribosomal protein L13,A52
7G
(G1)
60S ribosomal protein L14polymer13916301.51UniProt (Q9CR57)
Pfam (PF01929)
Mus musculus (house mouse)
8H
(H1)
60S ribosomal protein L15polymer20324076.11UniProt (Q9CZM2)
Pfam (PF00827)
Mus musculus (house mouse)
9I
(A2)
28S ribosomal RNApolymer36091169498.91Mus musculus
10J
(B2)
5S ribosomal RNApolymer12038691.91Mus musculus
11K
(C2)
5.8S ribosomal RNApolymer15650143.61GenBank (1756494520)Mus musculus (house mouse)
12L
(D2)
Large ribosomal subunit protein uL2polymer25127328.01UniProt (P62918)
Pfam (PF03947)
Pfam (PF00181)
Mus musculus (house mouse)60S ribosomal protein L8
13M
(E2)
Large ribosomal subunit protein uL3polymer40246080.91UniProt (P27659)
Pfam (PF00297)
Mus musculus (house mouse)60S ribosomal protein L3,J1 protein
14N
(F2)
Large ribosomal subunit protein uL4polymer35940891.21UniProt (Q9D8E6)
Pfam (PF00573)
Pfam (PF14374)
Mus musculus (house mouse)60S ribosomal protein L4
15O
(G2)
Large ribosomal subunit protein uL18polymer29334046.31UniProt (P47962)
Pfam (PF17144)
Pfam (PF14204)
Mus musculus (house mouse)60S ribosomal protein L5
16P
(H2)
60S ribosomal protein L6polymer22125410.21Pfam (PF03868)
Pfam (PF01159)
UniProt (by SIFTS) (P47911)
Mus musculus
17Q
(I2)
Large ribosomal subunit protein uL13polymer20123317.11UniProt (P19253)
Pfam (PF00572)
Mus musculus (house mouse)60S ribosomal protein L13a,Transplantation antigen P198,Tum-P198 antigen
18R
(J2)
60S ribosomal protein L17polymer15317758.71UniProt (Q9CPR4)
Pfam (PF00237)
Mus musculus (house mouse)
19S
(K2)
Large ribosomal subunit protein eL18polymer18621510.51UniProt (P35980)
Pfam (PF17135)
Mus musculus (house mouse)60S ribosomal protein L18
20T
(L2)
Large ribosomal subunit protein eL19polymer16419595.61UniProt (P84099)
Pfam (PF01280)
Pfam (PF25476)
Mus musculus (house mouse)60S ribosomal protein L19
21U
(M2)
Large ribosomal subunit protein eL20polymer17520647.31UniProt (P62717)
Pfam (PF01775)
Mus musculus (house mouse)60S ribosomal protein L18a
22V
(N2)
Large ribosomal subunit protein eL21polymer15918492.81UniProt (O09167)
Pfam (PF01157)
Mus musculus (house mouse)60S ribosomal protein L21
23W
(O2)
Large ribosomal subunit protein eL22polymer10111722.51UniProt (P67984)
Pfam (PF01776)
Mus musculus (house mouse)60S ribosomal protein L22,Heparin-binding protein HBp15
24X
(P2)
60S ribosomal protein L23polymer12913828.31UniProt (P62830)
Pfam (PF00238)
Mus musculus (house mouse)
25Y
(Q2)
Large ribosomal subunit protein eL24polymer627384.61UniProt (Q8BP67)
Pfam (PF01246)
Mus musculus (house mouse)60S ribosomal protein L24
26Z
(R2)
60S ribosomal protein L23apolymer11813727.21UniProt (P62751)
Pfam (PF03939)
Pfam (PF00276)
Mus musculus (house mouse)
27AA
(S2)
Large ribosomal subunit protein uL24polymer13415891.81UniProt (P61255)
Pfam (PF16906)
Pfam (PF00467)
Mus musculus (house mouse)60S ribosomal protein L26,Silica-induced gene 20 protein,SIG-20
28BA
(T2)
Large ribosomal subunit protein eL27polymer13515704.61UniProt (P61358)
Pfam (PF00467)
Pfam (PF01777)
Mus musculus (house mouse)60S ribosomal protein L27
29CA
(U2)
60S ribosomal protein L27apolymer14716517.41UniProt (P14115)
Pfam (PF00828)
Mus musculus (house mouse)L29
30DA
(V2)
Large ribosomal subunit protein eL29polymer11713500.31UniProt (P47915)
Pfam (PF01779)
Mus musculus (house mouse)60S ribosomal protein L29
31EA
(W2)
Large ribosomal subunit protein eL30polymer9410496.41UniProt (P62889)
Pfam (PF01248)
Mus musculus (house mouse)60S ribosomal protein L30
32FA
(X2)
Large ribosomal subunit protein eL31polymer10712635.71UniProt (P62900)
Pfam (PF01198)
Mus musculus (house mouse)60S ribosomal protein L31
33GA
(Y2)
Large ribosomal subunit protein eL32polymer12815022.01UniProt (P62911)
Pfam (PF01655)
Mus musculus (house mouse)60S ribosomal protein L32
34HA
(Z2)
60S ribosomal protein L35apolymer10912449.61UniProt (O55142)
Pfam (PF01247)
Mus musculus (house mouse)
35IA
(a2)
60S ribosomal protein L34polymer11412993.61UniProt (Q9D1R9)
Pfam (PF01199)
Mus musculus (house mouse)
36JA
(b2)
Large ribosomal subunit protein uL29polymer12014264.21UniProt (Q6ZWV7)
Pfam (PF00831)
Mus musculus (house mouse)60S ribosomal protein L35
37KA
(c2)
Large ribosomal subunit protein eL36polymer10211915.41UniProt (P47964)
Pfam (PF01158)
Mus musculus (house mouse)60S ribosomal protein L36
38LA
(d2)
Large ribosomal subunit protein eL37polymer8610090.91UniProt (Q9D823)
Pfam (PF01907)
Mus musculus (house mouse)60S ribosomal protein L37
39MA
(e2)
60S ribosomal protein L38polymer698093.71UniProt (Q9JJI8)
Pfam (PF01781)
Mus musculus (house mouse)
40NA
(f2)
Large ribosomal subunit protein eL39polymer506295.61UniProt (P62892)
Pfam (PF00832)
Mus musculus (house mouse)60S ribosomal protein L39
41OA
(g2)
Large ribosomal subunit protein eL40polymer526199.61UniProt (P62984)
Pfam (PF01020)
Mus musculus (house mouse)60S ribosomal protein L40,CEP52
42PA
(h2)
Small ribosomal subunit protein eS32polymer243344.31UniProt (P62947)
Pfam (PF05162)
Mus musculus (house mouse)60S ribosomal protein L41,Large ribosomal subunit protein eL41
43QA
(i2)
Large ribosomal subunit protein eL42polymer10312070.51UniProt (P83882)
Pfam (PF00935)
Mus musculus (house mouse)60S ribosomal protein L36a,60S ribosomal protein L44
44RA
(j2)
Large ribosomal subunit protein eL43polymer899967.91UniProt (P61514)
Pfam (PF01780)
Mus musculus (house mouse)60S ribosomal protein L37a
45SA
(k2)
Large ribosomal subunit protein eL28polymer12514306.81UniProt (P41105)
Pfam (PF01778)
Mus musculus (house mouse)60S ribosomal protein L28
46TA
(m2)
18S ribosomal RNApolymer1724556356.41Mus musculus
47UA
(n2)
Transfer RNApolymer7524231.51GenBank (174924)Mus musculus (house mouse)
48VA
(p2)
Small ribosomal subunit protein eS1polymer21424888.31UniProt (P97351)
Pfam (PF01015)
Mus musculus (house mouse)40S ribosomal protein S3a,Protein TU-11
49WA
(q2)
Small ribosomal subunit protein uS3polymer22625027.31UniProt (P62908)
Pfam (PF07650)
Pfam (PF00189)
Mus musculus (house mouse)40S ribosomal protein S3
50XA
(r2)
Small ribosomal subunit protein eS4polymer26229523.71UniProt (P62702)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
Mus musculus (house mouse)40S ribosomal protein S4,X isoform
51YA
(w2)
Small ribosomal subunit protein uS17polymer15317786.01UniProt (P62281)
Pfam (PF16205)
Pfam (PF00366)
Mus musculus (house mouse)40S ribosomal protein S11
52ZA
(z2)
40S ribosomal protein S17polymer11012481.41Pfam (PF00833)
UniProt (by SIFTS) (P63276)
Mus musculus
53AB
(o2)
Small ribosomal subunit protein uS2polymer21424102.61UniProt (P14206)
Pfam (PF00318)
Mus musculus (house mouse)37 kDa laminin receptor precursor,37LRP,37 kDa oncofetal antigen,37/67 kDa laminin receptor,LRP/LR,40S ribosomal protein SA,67 kDa laminin receptor,67LR,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,OFA/iLRP
54BB
(s2)
40S ribosomal protein S5polymer14215981.61Pfam (PF00177)
UniProt (by SIFTS) (P97461)
Mus musculus
55CB
(v2)
40S ribosomal protein S10polymer586956.31Pfam (PF03501)
UniProt (by SIFTS) (P63325)
Mus musculus
56DB
(x2)
Small ribosomal subunit protein uS19polymer13015328.11UniProt (P62843)
Pfam (PF00203)
Mus musculus (house mouse)40S ribosomal protein S15,RIG protein
57EB
(y2)
Small ribosomal subunit protein uS9polymer14416249.11UniProt (P14131)
Pfam (PF00380)
Mus musculus (house mouse)40S ribosomal protein S16
58FB
(A3)
Small ribosomal subunit protein uS13polymer14416898.61UniProt (P62270)
Pfam (PF00416)
Mus musculus (house mouse)40S ribosomal protein S18,Ke-3,Ke3
59GB
(B3)
Small ribosomal subunit protein eS19polymer14115694.01UniProt (Q9CZX8)
Pfam (PF01090)
Mus musculus (house mouse)40S ribosomal protein S19
60HB
(C3)
40S ribosomal protein S20polymer161759.01UniProt (by SIFTS) (P60867)Mus musculus
61IB
(D3)
Small ribosomal subunit protein eS21polymer839154.41UniProt (Q9CQR2)
Pfam (PF01249)
Mus musculus (house mouse)40S ribosomal protein S21
62JB
(E3)
Small ribosomal subunit protein uS12polymer14115626.41UniProt (P62267)
Pfam (PF00164)
Mus musculus (house mouse)40S ribosomal protein S23
63KB
(G3)
40S ribosomal protein S28polymer7735.81Mus musculus
64LB
(H3)
Small ribosomal subunit protein uS14polymer546502.61UniProt (P62274)
Pfam (PF00253)
Mus musculus (house mouse)40S ribosomal protein S29
65MB
(I3)
Receptor of activated protein C kinase 1polymer16918759.11Pfam (PF00400)
UniProt (by SIFTS) (P68040)
Mus musculus
66NB
(J3)
Small ribosomal subunit protein uS5polymer22224569.01UniProt (P25444)
Pfam (PF00333)
Pfam (PF03719)
Mus musculus (house mouse)40S ribosomal protein S2,40S ribosomal protein S4,Protein LLRep3
67OB
(K3)
40S ribosomal protein S6polymer18721724.91Pfam (PF01092)
UniProt (by SIFTS) (P62754)
Mus musculus
68PB
(L3)
Small ribosomal subunit protein uS4polymer18521649.61UniProt (Q6ZWN5)
Pfam (PF00163)
Pfam (PF01479)
Mus musculus (house mouse)40S ribosomal protein S9
69QB
(N3)
Small ribosomal subunit protein uS15polymer15017128.21UniProt (P62301)
Pfam (PF08069)
Pfam (PF00312)
Mus musculus (house mouse)40S ribosomal protein S13
70RB
(P3)
Small ribosomal subunit protein uS8polymer12914734.41UniProt (P62245)
Pfam (PF00410)
Mus musculus (house mouse)40S ribosomal protein S15a
71SB
(Q3)
Small ribosomal subunit protein eS24polymer12914976.71UniProt (P62849)
Pfam (PF01282)
Mus musculus (house mouse)40S ribosomal protein S24
72TB
(S3)
Small ribosomal subunit protein eS27-likepolymer839365.01UniProt (Q6ZWY3)
Pfam (PF01667)
Mus musculus (house mouse)40S ribosomal protein S27-like
73UB
(T3)
40S ribosomal protein S30polymer414682.51Pfam (PF04758)
UniProt (by SIFTS) (P62862)
Mus musculus
74VB
(Bx)
Messenger RNApolymer103016.71Mus musculus
75WB
(F3)
Small ribosomal subunit protein eS26polymer9711087.11UniProt (P62855)
Pfam (PF01283)
Mus musculus (house mouse)40S ribosomal protein S26
76XB
(O3)
Small ribosomal subunit protein uS11polymer13314231.31UniProt (P62264)
Pfam (PF00411)
Mus musculus (house mouse)40S ribosomal protein S14
77AC, BC, CC, EC, YB...
(i2, j2, H3, F3, d2...)
ZINC IONnon-polymer65.46Chemie (ZN)
78DC
(H3)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
79FC, GC, HC
(B1, A2, m2)
waterwater18.04Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains76
Total formula weight3015540.4
Non-Polymers*Number of molecules7
Total formula weight416.8
All*Total formula weight3015957.1
*Water molecules are not included.

249697

PDB entries from 2026-02-25

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