9H22
Cryo EM structure of RC-dLH complex model II from Gemmatimonas groenlandica
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (S) | reaction centre S sub unit | polymer | 204 | 21641.6 | 1 | UniProt (A0A6M4IPJ3) | Gemmatimonas groenlandica | |
| 2 | B (L) | Reaction center protein L chain | polymer | 274 | 30542.7 | 1 | UniProt (A0A6M4IPC7) Pfam (PF00124) | Gemmatimonas groenlandica | Photosynthetic reaction center L subunit |
| 3 | C (M) | Reaction center protein M chain | polymer | 392 | 43396.7 | 1 | UniProt (A0A6M4ILR2) Pfam (PF00124) | Gemmatimonas groenlandica | Photosynthetic reaction center M subunit |
| 4 | D (H) | reaction centre Ht su unit | polymer | 66 | 7771.8 | 1 | Gemmatimonas groenlandica | ||
| 5 | E (K) | reaction centre Hc sub unit | polymer | 180 | 19669.3 | 1 | Gemmatimonas groenlandica | ||
| 6 | F (C) | Photosynthetic reaction center cytochrome c subunit | polymer | 373 | 40302.8 | 1 | UniProt (A0A6M4ITL7) Pfam (PF02276) | Gemmatimonas groenlandica | |
| 7 | AA, AB, CA, EA, G... (AA, AB, AC, AD, AE...) | Light-harvesting protein | polymer | 56 | 6413.6 | 24 | UniProt (A0A6M4IQ17) Pfam (PF00556) | Gemmatimonas groenlandica | |
| 8 | BA, BB, BC, DA, DB... (BA, BB, BC, BD, BE...) | Light-harvesting protein | polymer | 44 | 5184.0 | 40 | UniProt (A0A6M4IQ93) Pfam (PF00556) | Gemmatimonas groenlandica | |
| 9 | AC, CB, CC, EB, EC... (Aa, Ab, Ac, Ad, Ae...) | Light-harvesting protein | polymer | 71 | 7697.1 | 16 | UniProt (A0A6M4INU2) Pfam (PF00556) | Gemmatimonas groenlandica | |
| 10 | AE, AF, AI, AK, BH... (AF, BL, Af, Bp, BX...) | BACTERIOCHLOROPHYLL A | non-polymer | 911.5 | 84 | Chemie (BCL) | |||
| 11 | KC, WC (L, M) | BACTERIOPHEOPHYTIN A | non-polymer | 889.2 | 2 | Chemie (BPH) | |||
| 12 | AG, AJ, BF, CH, DE... (BR, Bk, BL, BX, BG...) | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 48 | Chemie (LMT) | |||
| 13 | AD, PH, RC (M, Ad, L) | MENAQUINONE 8 | non-polymer | 717.1 | 3 | Chemie (MQ8) | |||
| 14 | SC (M) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
| 15 | TC, ZH (M, Af) | (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate | non-polymer | 1241.6 | 2 | Chemie (CD4) | |||
| 16 | XC (M) | SPIRILLOXANTHIN | non-polymer | 596.9 | 1 | Chemie (CRT) | |||
| 17 | BK, CE, DJ, EI, GH... (Bp, AG, Bk, Bf, Ba...) | 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE | non-polymer | 522.6 | 17 | Chemie (PEX) | |||
| 18 | BD, CD, DD, ED (C) | HEME C | non-polymer | 618.5 | 4 | Chemie (HEC) | |||
| 19 | AH, BE, BG, BJ, CI... (BX, AF, BR, Bk, Bf...) | (2~{E},4~{E},6~{E},10~{E},12~{E},14~{E},16~{E},18~{E},20~{E},22~{Z},24~{E},26~{E},28~{E})-23-methanoyl-31-methoxy-2,6,10,14,19,27,31-heptamethyl-dotriaconta-2,4,6,10,12,14,16,18,20,22,24,26,28-tridecaenoic acid | non-polymer | 610.9 | 40 | Chemie (V7N) | |||
| 20 | CK, DK, EK, FK, GK... (S, L, M, K, C...) | water | water | 18.0 | 38 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 86 |
| Total formula weight | 647764.3 | |
| Non-Polymers* | Number of molecules | 202 |
| Total formula weight | 143935.0 | |
| All* | Total formula weight | 791699.4 |
