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9GNN

Structure of SENP5 in complex with SUMO2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Sentrin-specific protease 5polymer20724420.32UniProt (Q96HI0)
Pfam (PF02902)
Homo sapiens (human)Sentrin/SUMO-specific protease SENP5
2C, D
(C, D)
Small ubiquitin-related modifier 3polymer799137.32UniProt (P55854)
Pfam (PF11976)
Homo sapiens (human)SUMO-3,SMT3 homolog 1,SUMO-2,Ubiquitin-like protein SMT3A,Smt3A
3E, F
(A, B)
prop-2-en-1-aminenon-polymer57.12Chemie (AYE)
4G, H, I
(A, B, C)
waterwater18.024Chemie (HOH)
Sequence modifications
A, B: 568 - 755 (UniProt: Q96HI0)
PDBExternal DatabaseDetails
His 549-expression tag
His 550-expression tag
His 551-expression tag
His 552-expression tag
His 553-expression tag
His 554-expression tag
Ser 555-expression tag
Ser 556-expression tag
Gly 557-expression tag
Leu 558-expression tag
Val 559-expression tag
Pro 560-expression tag
Arg 561-expression tag
Gly 562-expression tag
Ser 563-expression tag
His 564-expression tag
Met 565-expression tag
Ala 566-expression tag
Ser 567-expression tag
C, D: 15 - 92 (UniProt: P55854)
PDBExternal DatabaseDetails
Met 14-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight67115.1
Non-Polymers*Number of molecules2
Total formula weight114.2
All*Total formula weight67229.3
*Water molecules are not included.

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PDB entries from 2025-12-24

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