9GNN
Structure of SENP5 in complex with SUMO2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Sentrin-specific protease 5 | polymer | 207 | 24420.3 | 2 | UniProt (Q96HI0) Pfam (PF02902) | Homo sapiens (human) | Sentrin/SUMO-specific protease SENP5 |
| 2 | C, D (C, D) | Small ubiquitin-related modifier 3 | polymer | 79 | 9137.3 | 2 | UniProt (P55854) Pfam (PF11976) | Homo sapiens (human) | SUMO-3,SMT3 homolog 1,SUMO-2,Ubiquitin-like protein SMT3A,Smt3A |
| 3 | E, F (A, B) | prop-2-en-1-amine | non-polymer | 57.1 | 2 | Chemie (AYE) | |||
| 4 | G, H, I (A, B, C) | water | water | 18.0 | 24 | Chemie (HOH) |
Sequence modifications
A, B: 568 - 755 (UniProt: Q96HI0)
C, D: 15 - 92 (UniProt: P55854)
| PDB | External Database | Details |
|---|---|---|
| His 549 | - | expression tag |
| His 550 | - | expression tag |
| His 551 | - | expression tag |
| His 552 | - | expression tag |
| His 553 | - | expression tag |
| His 554 | - | expression tag |
| Ser 555 | - | expression tag |
| Ser 556 | - | expression tag |
| Gly 557 | - | expression tag |
| Leu 558 | - | expression tag |
| Val 559 | - | expression tag |
| Pro 560 | - | expression tag |
| Arg 561 | - | expression tag |
| Gly 562 | - | expression tag |
| Ser 563 | - | expression tag |
| His 564 | - | expression tag |
| Met 565 | - | expression tag |
| Ala 566 | - | expression tag |
| Ser 567 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 14 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 67115.1 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 114.2 | |
| All* | Total formula weight | 67229.3 |






