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9GMR

SIRT7-H3K36MTUnucleosome complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Histone H3.2polymer13615421.12UniProt (Q71DI3)
Pfam (PF00125)
Homo sapiens (human)H3-clustered histone 13,H3-clustered histone 14,H3-clustered histone 15,Histone H3/m,Histone H3/o
2B, F
(B, F)
Histone H4polymer10311394.42UniProt (P62805)
Pfam (PF15511)
Homo sapiens (human)
3C, G
(C, G)
Histone H2A type 2-Apolymer12913994.42UniProt (Q6FI13)
Pfam (PF00125)
Pfam (PF16211)
Homo sapiens (human)Histone H2A.2,Histone H2A/o
4D, H
(D, H)
Histone H2B type 1-Jpolymer12613907.22UniProt (P06899)
Pfam (PF00125)
Homo sapiens (human)Histone H2B.1,Histone H2B.r,H2B/r
5I
(I)
DNA (149-MER)polymer14945701.11Homo sapiens
6J
(J)
DNA (149-MER)polymer14946283.51Homo sapiens
7K
(K)
NAD-dependent protein deacetylase sirtuin-7polymer40145035.61UniProt (Q9NRC8)
Pfam (PF02146)
Homo sapiens (human)NAD-dependent protein deacylase sirtuin-7,Regulatory protein SIR2 homolog 7,SIR2-like protein 7
8L
(A)
[[(2~{R},3~{a}~{R},5~{R},6~{R},6~{a}~{R})-2-(methylamino)-6-oxidanyl-2-(propylamino)-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]oxathiol-5-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphatenon-polymer673.51Chemie (A1IY0)
9M
(K)
ZINC IONnon-polymer65.41Chemie (ZN)
Sequence modifications
A, E: 0 - 135 (UniProt: Q71DI3)
PDBExternal DatabaseDetails
Cys 47Ala 48conflict
Ala 110Cys 111conflict
D, H: 0 - 125 (UniProt: P06899)
PDBExternal DatabaseDetails
Lys 31Arg 32conflict
K: 1 - 400 (UniProt: Q9NRC8)
PDBExternal DatabaseDetails
Gly 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight246454.4
Non-Polymers*Number of molecules2
Total formula weight738.9
All*Total formula weight247193.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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