9GJQ
Crystal structure of humanised cereblon from Magnetospirillum gryphiswaldense bound by dihydrouracil-indole compound [1-(1H-indol-6-yl)dihydro-2,4(1H,3H)-pyrimidinedione].
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Cereblon isoform 4 | polymer | 109 | 12043.5 | 1 | UniProt (A4TVL0) | Magnetospirillum gryphiswaldense | |
| 2 | B (A) | 1-(1H-indol-6-yl)-1,3-diazinane-2,4-dione | non-polymer | 229.2 | 1 | Chemie (A1IMN) | |||
| 3 | C (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 4 | D (A) | water | water | 18.0 | 116 | Chemie (HOH) |
Sequence modifications
A: 18 - 124 (UniProt: A4TVL0)
| PDB | External Database | Details |
|---|---|---|
| Gly 16 | - | expression tag |
| Ser 17 | - | expression tag |
| His 52 | Ala 52 | engineered mutation |
| Tyr 54 | Met 54 | engineered mutation |
| His 56 | Phe 56 | engineered mutation |
| His 77 | Phe 77 | engineered mutation |
| Phe 101 | Tyr 101 | engineered mutation |
| Ala 117 | Arg 117 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 12043.5 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 294.6 | |
| All* | Total formula weight | 12338.2 |






