9GJ5
Human 80S ribosome in complex with NatA in distal position and Ebp1
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (2) | N-alpha-acetyltransferase 10 | polymer | 171 | 20003.8 | 1 | UniProt (P41227) Pfam (PF00583) | Homo sapiens (human) | N-terminal acetyltransferase complex ARD1 subunit homolog A,hARD1,NatA catalytic subunit Naa10 |
| 2 | B (8) | 5.8S rRNA | polymer | 157 | 50449.8 | 1 | GenBank (1142736641) | Homo sapiens (human) | |
| 3 | C (B) | N-alpha-acetyltransferase 15, NatA auxiliary subunit | polymer | 840 | 98658.6 | 1 | UniProt (Q9BXJ9) Pfam (PF13181) Pfam (PF12569) | Homo sapiens (human) | Gastric cancer antigen Ga19,N-terminal acetyltransferase,NMDA receptor-regulated protein 1,Protein tubedown-1,Tbdn100 |
| 4 | D (1) | 28S rRNA | polymer | 5070 | 1640222.1 | 1 | Homo sapiens (human) | ||
| 5 | E (LC) | 60S ribosomal protein L4 | polymer | 427 | 47804.6 | 1 | UniProt (P36578) Pfam (PF00573) Pfam (PF14374) | Homo sapiens (human) | 60S ribosomal protein L1,Large ribosomal subunit protein uL4 |
| 6 | F (LE) | Large ribosomal subunit protein eL6 | polymer | 288 | 32810.2 | 1 | UniProt (Q02878) Pfam (PF03868) Pfam (PF01159) | Homo sapiens (human) | 60S ribosomal protein L6,Neoplasm-related protein C140,Tax-responsive enhancer element-binding protein 107,TaxREB107 |
| 7 | G (Lk) | 60S ribosomal protein L38 | polymer | 70 | 8238.9 | 1 | UniProt (P63173) Pfam (PF01781) | Homo sapiens (human) | Large ribosomal subunit protein eL38 |
| 8 | H (LY) | Large ribosomal subunit protein uL24 | polymer | 144 | 17174.2 | 1 | UniProt (P61254) Pfam (PF16906) Pfam (PF00467) | Homo sapiens (human) | 60S ribosomal protein L26 |
| 9 | I (Lh) | 60S ribosomal protein L35 | polymer | 122 | 14462.4 | 1 | UniProt (P42766) Pfam (PF00831) | Homo sapiens (human) | Large ribosomal subunit protein uL29 |
| 10 | J (LX) | 60S ribosomal protein L23a | polymer | 156 | 17740.2 | 1 | UniProt (P62750) Pfam (PF03939) Pfam (PF00276) | Homo sapiens (human) | Large ribosomal subunit protein uL23 |
| 11 | K (LR) | 60S ribosomal protein L19 | polymer | 196 | 23535.3 | 1 | UniProt (P84098) Pfam (PF25476) Pfam (PF01280) | Homo sapiens (human) | Large ribosomal subunit protein eL19 |
| 12 | L (Lr) | 60S ribosomal protein L28 | polymer | 137 | 15784.6 | 1 | UniProt (P46779) Pfam (PF01778) | Homo sapiens (human) | Large ribosomal subunit protein eL28 |
| 13 | M (A) | Proliferation-associated protein 2G4 | polymer | 394 | 43851.9 | 1 | UniProt (Q9UQ80) Pfam (PF00557) | Homo sapiens (human) | Cell cycle protein p38-2G4 homolog,hG4-1,ErbB3-binding protein 1 |
| 14 | N (B) | D-chiro inositol hexakisphosphate | non-polymer | 660.0 | 1 | Chemie (KGN) |
Sequence modifications
2: 2 - 170 (UniProt: P41227)
B: 1 - 840 (UniProt: Q9BXJ9)
LY: 1 - 144 (UniProt: P61254)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| Gly 1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| - | Ala 719 | deletion |
| PDB | External Database | Details |
|---|---|---|
| - | Lys 130 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 13 |
| Total formula weight | 2030736.7 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 660.0 | |
| All* | Total formula weight | 2031396.7 |
