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9GDX

SARS-CoV-2 Spike protein Beta Variant at 4C structural flexibility / heterogeneity analyses

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Spike glycoprotein,Fibritinpolymer1230136142.73UniProt (P0DTC2)
UniProt (P10104)
Pfam (PF16451)
Pfam (PF09408)
Pfam (PF19209)
Pfam (PF01601)
Severe acute respiratory syndrome coronavirus 2S glycoprotein,E2,Peplomer protein,Collar protein,Whisker antigen control protein
Sequence modifications
A, B, C: 14 - 1208 (UniProt: P0DTC2)
PDBExternal DatabaseDetails
Phe 18Leu 18variant
Ala 80Asp 80variant
Gly 215Asp 215variant
-Leu 242deletion
-Ala 243deletion
-Leu 244deletion
Ile 246Arg 246conflict
Asn 417Lys 417variant
Lys 484Glu 484variant
Tyr 501Asn 501variant
Gly 614Asp 614variant
Gly 682Arg 682engineered mutation
Ser 683Arg 683engineered mutation
Ser 685Arg 685engineered mutation
Val 701Ala 701variant
Pro 986Lys 986engineered mutation
Pro 987Val 987engineered mutation
Gly 1209-linker
Ser 1210-linker
A, B, C: 1211 - 1237 (UniProt: P10104)
PDBExternal DatabaseDetails
Leu 1232Phe 479engineered mutation
Gly 1238-expression tag
Arg 1239-expression tag
Ser 1240-expression tag
Leu 1241-expression tag
Glu 1242-expression tag
Val 1243-expression tag
Leu 1244-expression tag
Phe 1245-expression tag
Gln 1246-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight408428.1
All*Total formula weight408428.1
*Water molecules are not included.

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PDB entries from 2025-06-11

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