9GDX
SARS-CoV-2 Spike protein Beta Variant at 4C structural flexibility / heterogeneity analyses
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C (A, B, C) | Spike glycoprotein,Fibritin | polymer | 1230 | 136142.7 | 3 | UniProt (P0DTC2) UniProt (P10104) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) | Severe acute respiratory syndrome coronavirus 2 | S glycoprotein,E2,Peplomer protein,Collar protein,Whisker antigen control protein |
Sequence modifications
A, B, C: 14 - 1208 (UniProt: P0DTC2)
A, B, C: 1211 - 1237 (UniProt: P10104)
PDB | External Database | Details |
---|---|---|
Phe 18 | Leu 18 | variant |
Ala 80 | Asp 80 | variant |
Gly 215 | Asp 215 | variant |
- | Leu 242 | deletion |
- | Ala 243 | deletion |
- | Leu 244 | deletion |
Ile 246 | Arg 246 | conflict |
Asn 417 | Lys 417 | variant |
Lys 484 | Glu 484 | variant |
Tyr 501 | Asn 501 | variant |
Gly 614 | Asp 614 | variant |
Gly 682 | Arg 682 | engineered mutation |
Ser 683 | Arg 683 | engineered mutation |
Ser 685 | Arg 685 | engineered mutation |
Val 701 | Ala 701 | variant |
Pro 986 | Lys 986 | engineered mutation |
Pro 987 | Val 987 | engineered mutation |
Gly 1209 | - | linker |
Ser 1210 | - | linker |
PDB | External Database | Details |
---|---|---|
Leu 1232 | Phe 479 | engineered mutation |
Gly 1238 | - | expression tag |
Arg 1239 | - | expression tag |
Ser 1240 | - | expression tag |
Leu 1241 | - | expression tag |
Glu 1242 | - | expression tag |
Val 1243 | - | expression tag |
Leu 1244 | - | expression tag |
Phe 1245 | - | expression tag |
Gln 1246 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 408428.1 | |
All* | Total formula weight | 408428.1 |