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9GAE

Respiratory supercomplex CI1-CIII2-CIV2 from alphaproteobacterium

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NADH-quinone oxidoreductase subunit Apolymer12113686.11UniProt (A1B498)Paracoccus denitrificans PD1222
2B
(B)
NADH-quinone oxidoreductase subunit Bpolymer17519525.51UniProt (A1B497)Paracoccus denitrificans PD1222
3C
(C)
NADH-quinone oxidoreductase subunit Cpolymer20823920.11UniProt (A1B496)Paracoccus denitrificans PD1222
4D
(D)
NADH-quinone oxidoreductase subunit Dpolymer41246811.51UniProt (A1B495)Paracoccus denitrificans PD1222
5E
(E)
NADH dehydrogenase subunit Epolymer23926145.91UniProt (A1B494)Paracoccus denitrificans PD1222
6F
(F)
NADH-quinone oxidoreductase subunit Fpolymer43147281.11UniProt (A1B491)Paracoccus denitrificans PD1222
7G
(G)
NADH-quinone oxidoreductasepolymer67473289.41UniProt (A1B489)Paracoccus denitrificans PD1222
8H
(H)
NADH-quinone oxidoreductase subunit Hpolymer34538861.21UniProt (A1B487)Paracoccus denitrificans PD1222
9I
(I)
NADH-quinone oxidoreductase subunit Ipolymer16318925.61UniProt (A1B486)Paracoccus denitrificans PD1222
10J
(J)
NADH-quinone oxidoreductase subunit Jpolymer19921732.01UniProt (A1B483)Paracoccus denitrificans PD1222
11K
(K)
NADH-quinone oxidoreductase subunit Kpolymer10110863.11UniProt (A1B482)Paracoccus denitrificans PD1222NADH dehydrogenase I subunit K,NADH dehydrogenase I,subunit 11,NADH-quinone oxidoreductase subunit 11,NQO11,NDH-1 subunit K,NDH-1
12L
(L)
NADH dehydrogenase subunit Lpolymer70377839.41UniProt (A1B481)Paracoccus denitrificans PD1222
13M
(M)
NADH dehydrogenase subunit Mpolymer51356547.91UniProt (A1B480)Paracoccus denitrificans PD1222
14N
(N)
NADH-quinone oxidoreductase subunit Npolymer49952564.81UniProt (A1B479)Paracoccus denitrificans PD1222
15O
(P)
NAD-dependent epimerase/dehydratasepolymer33035386.61UniProt (A1AZB0)Paracoccus denitrificans PD1222
16P
(Q)
ETC complex I subunit conserved regionpolymer10312048.41UniProt (A1B1M0)Paracoccus denitrificans PD1222
17Q
(R)
Zinc finger CHCC-type domain-containing proteinpolymer627069.91UniProt (A1B357)Paracoccus denitrificans PD1222
18R
(Z)
Protein-L-isoaspartate O-methyltransferasepolymer21723528.91UniProt (A1B5L6)Paracoccus denitrificans PD1222
19S, V
(a, d)
Cytochrome bpolymer44050154.72UniProt (A1B4F3)Paracoccus denitrificans PD1222
20T, W
(b, e)
Cytochrome c1polymer45046904.32UniProt (A1B4F4)Paracoccus denitrificans PD1222
21U, X
(c, f)
Ubiquinol-cytochrome c reductase iron-sulfur subunitpolymer19520889.22UniProt (A1B4F2)Paracoccus denitrificans PD1222
22CA, Y
(g, k)
Cytochrome c oxidase subunit 1polymer55862486.62UniProt (A1B3D7)Paracoccus denitrificans PD1222
23DA, Z
(h, l)
Cytochrome c oxidase subunit 2polymer29832563.62UniProt (A1BA41)Paracoccus denitrificans PD1222
24AA, EA
(i, m)
cytochrome-c oxidasepolymer27430833.22UniProt (A1BA37)Paracoccus denitrificans PD1222Cytochrome aa3 subunit 3,Cytochrome c oxidase polypeptide III
25BA, FA
(j, n)
Aa3 type cytochrome c oxidase subunit IVpolymer667351.52UniProt (A1AZ52)Paracoccus denitrificans PD1222
26GA, HA
(o, p)
Cytochrome c, class Ipolymer17618177.42UniProt (A1B311)Paracoccus denitrificans PD1222
27IA
(q)
NADH:ubiquinone oxidoreductase 17.2 kD subunitpolymer12414460.91UniProt (A1B1H8)Paracoccus denitrificans PD1222
28AB, AD, BG, CB, CE...
(H, a, i, d, m...)
1,2-Distearoyl-sn-glycerophosphoethanolaminenon-polymer748.139Chemie (3PE)
29AC, BB, FD, IB, KA...
(M, H, a, J, A...)
(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATEnon-polymer751.012Chemie (PGT)
30CH, DE, EE, FC, FG...
(m, d, M, i, a...)
2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diolnon-polymer516.829Chemie (DU0)
31GB, HB, MA, RA, UA...
(I, B, F, G)
IRON/SULFUR CLUSTERnon-polymer351.66Chemie (SF4)
32CD, DD, NA, WD, YD
(a, B, d)
UBIQUINONE-10non-polymer863.35Chemie (U10)
33AG, AH, BE, DG, DH...
(i, l, d, m, g...)
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEnon-polymer790.135Chemie (PC1)
34AF, JE, LD, NG, PA
(g, e, b, k, D)
CALCIUM IONnon-polymer40.15Chemie (CA)
35QA, QD, RE, TA
(E, c, f, G)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.84Chemie (FES)
36SA
(F)
FLAVIN MONONUCLEOTIDEnon-polymer456.31Chemie (FMN)
37AE, BC, BD, BH, CC...
(d, M, a, m, g...)
1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATEnon-polymer705.033Chemie (3PH)
38ED, FB, WB
(a, I, L)
O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serinenon-polymer792.13Chemie (P5S)
39HF, JB
(g, J)
Phosphatidylinositolnon-polymer887.12Chemie (T7X)
40CG, IH, RC
(i, m, R)
ZINC IONnon-polymer65.43Chemie (ZN)
41GD, GE, WC, ZD
(a, d)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.54Chemie (HEM)
42KD, ME
(b, e)
HEME Cnon-polymer618.52Chemie (HEC)
43TD
(d)
CARDIOLIPINnon-polymer1464.01Chemie (CDL)
44CF, PG, QG, YE
(g, k)
HEME-Anon-polymer852.84Chemie (HEA)
45BF, VG
(g, k)
COPPER (II) IONnon-polymer63.52Chemie (CU)
46GF, WG
(g, k)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
47OF, YG
(h, l)
DINUCLEAR COPPER IONnon-polymer127.12Chemie (CUA)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains35
Total formula weight1159209.5
Non-Polymers*Number of molecules194
Total formula weight125295.4
All*Total formula weight1284504.9
*Water molecules are not included.

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PDB entries from 2026-02-04

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