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9G8S

C3 reconstruction of extended phiCD508 needle

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BA, CA, G, H...
(C, G, A, H, B...)
Baseplate J family proteinpolymer37841502.512UniProt (J9QE72)
Pfam (PF04865)
Clostridioides phage phiCD508
2B, DA, I, KA, P...
(N, M, O, P, Q...)
XkdT-related proteinpolymer15718034.86UniProt (J9QE20)
Pfam (PF10076)
Clostridioides phage phiCD508
3C, EA, J, LA, Q...
(T, S, U, V, W...)
Peptidoglycan-binding LysM proteinpolymer22325899.86UniProt (J9QE19)
Pfam (PF01476)
Clostridioides phage phiCD508
4D, FA, K, MA, R...
(Z, Y, a, b, c...)
XkdM-related proteinpolymer13014657.66UniProt (J9QE18)
Pfam (PF09393)
Clostridioides phage phiCD508
5E, GA, L, NA, S...
(g, e, f, h, i...)
Tail sheathpolymer46051405.06UniProt (J9QE70)
Pfam (PF17481)
Pfam (PF04984)
Pfam (PF17482)
Clostridioides phage phiCD508
6AA, F, HA, M, OA...
(m, k, l, n, o...)
XkdS-related proteinpolymer12514454.46UniProt (J9QEB8)
Pfam (PF10934)
Clostridioides phage phiCD508
7QA, RA, TA
(r, v, s)
Phage proteinpolymer11212476.33UniProt (J9QD14)
UniProt (by SIFTS) (A0A0A8WFG6)
Clostridioides phage phiCD508
8SA, UA, VA
(q, t, u)
XkdQ-related proteinpolymer31636291.73UniProt (J9QDX2)
UniProt (by SIFTS) (A0A0A8WIZ7)
Clostridioides phage phiCD508
9WA, XA, YA
(w, x, y)
Tail tape measurepolymer1424150075.23UniProt (J9QEB7)
Pfam (PF10145)
Clostridioides phage phiCD508
10ZA
(v)
FE (II) IONnon-polymer55.81Chemie (FE2)
Sequence modifications
g, e, f, h, i, j: 13 - 472 (UniProt: J9QE70)
PDBExternal DatabaseDetails
Ala 23Thr 23conflict
Ala 28Ser 28conflict
Ala 29Thr 29conflict
Ala 30Asn 30conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains51
Total formula weight1841269.4
Non-Polymers*Number of molecules1
Total formula weight55.8
All*Total formula weight1841325.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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