9G83
Respiratory supercomplex CI1-CIII2-CIV2-(cbb3)1 from alphaproteobacterium
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | NADH-quinone oxidoreductase subunit A | polymer | 121 | 13686.1 | 1 | UniProt (A1B498) Pfam (PF00507) | Paracoccus denitrificans PD1222 | |
| 2 | B (B) | NADH-quinone oxidoreductase subunit B | polymer | 175 | 19525.5 | 1 | UniProt (A1B497) Pfam (PF01058) | Paracoccus denitrificans PD1222 | |
| 3 | C (C) | NADH-quinone oxidoreductase subunit C | polymer | 208 | 23920.1 | 1 | UniProt (A1B496) Pfam (PF00329) | Paracoccus denitrificans PD1222 | |
| 4 | D (D) | NADH-quinone oxidoreductase subunit D | polymer | 412 | 46811.5 | 1 | UniProt (A1B495) Pfam (PF00346) | Paracoccus denitrificans PD1222 | |
| 5 | E (E) | NADH dehydrogenase subunit E | polymer | 239 | 26145.9 | 1 | UniProt (A1B494) Pfam (PF01257) | Paracoccus denitrificans PD1222 | |
| 6 | F (F) | NADH-quinone oxidoreductase subunit F | polymer | 431 | 47281.1 | 1 | UniProt (A1B491) Pfam (PF01512) Pfam (PF22461) Pfam (PF10589) | Paracoccus denitrificans PD1222 | |
| 7 | G (G) | NADH-quinone oxidoreductase | polymer | 674 | 73289.4 | 1 | UniProt (A1B489) Pfam (PF10588) Pfam (PF22117) Pfam (PF22151) Pfam (PF00384) Pfam (PF09326) Pfam (PF13510) | Paracoccus denitrificans PD1222 | |
| 8 | H (H) | NADH-quinone oxidoreductase subunit H | polymer | 345 | 38861.2 | 1 | UniProt (A1B487) Pfam (PF00146) | Paracoccus denitrificans PD1222 | |
| 9 | I (I) | NADH-quinone oxidoreductase subunit I | polymer | 163 | 18925.6 | 1 | UniProt (A1B486) Pfam (PF12838) | Paracoccus denitrificans PD1222 | |
| 10 | J (J) | NADH-quinone oxidoreductase subunit J | polymer | 199 | 21732.0 | 1 | UniProt (A1B483) Pfam (PF00499) | Paracoccus denitrificans PD1222 | |
| 11 | K (K) | NADH-quinone oxidoreductase subunit K | polymer | 101 | 10863.1 | 1 | UniProt (A1B482) Pfam (PF00420) | Paracoccus denitrificans PD1222 | NADH dehydrogenase I subunit K,NADH dehydrogenase I,subunit 11,NADH-quinone oxidoreductase subunit 11,NQO11,NDH-1 subunit K,NDH-1 |
| 12 | L (L) | NADH dehydrogenase subunit L | polymer | 703 | 77839.4 | 1 | UniProt (A1B481) Pfam (PF00662) Pfam (PF00361) | Paracoccus denitrificans PD1222 | |
| 13 | M (M) | NADH dehydrogenase subunit M | polymer | 513 | 56547.9 | 1 | UniProt (A1B480) Pfam (PF00361) | Paracoccus denitrificans PD1222 | |
| 14 | N (N) | NADH-quinone oxidoreductase subunit N | polymer | 499 | 52564.8 | 1 | UniProt (A1B479) Pfam (PF00361) | Paracoccus denitrificans PD1222 | |
| 15 | O (P) | NAD-dependent epimerase/dehydratase | polymer | 330 | 35386.6 | 1 | UniProt (A1AZB0) Pfam (PF01370) | Paracoccus denitrificans PD1222 | |
| 16 | P (Q) | ETC complex I subunit conserved region | polymer | 103 | 12048.4 | 1 | UniProt (A1B1M0) Pfam (PF04800) | Paracoccus denitrificans PD1222 | |
| 17 | Q (R) | Zinc finger CHCC-type domain-containing protein | polymer | 62 | 7069.9 | 1 | UniProt (A1B357) Pfam (PF10276) | Paracoccus denitrificans PD1222 | |
| 18 | R (Z) | Protein-L-isoaspartate O-methyltransferase | polymer | 217 | 23528.9 | 1 | UniProt (A1B5L6) Pfam (PF01135) | Paracoccus denitrificans PD1222 | |
| 19 | S, V (a, d) | Cytochrome b | polymer | 440 | 50154.7 | 2 | UniProt (A1B4F3) Pfam (PF00033) Pfam (PF00032) | Paracoccus denitrificans PD1222 | |
| 20 | T, W (b, e) | Cytochrome c1 | polymer | 450 | 46904.3 | 2 | UniProt (A1B4F4) Pfam (PF02167) | Paracoccus denitrificans PD1222 | |
| 21 | U, X (c, f) | Ubiquinol-cytochrome c reductase iron-sulfur subunit | polymer | 195 | 20889.2 | 2 | UniProt (A1B4F2) Pfam (PF10399) Pfam (PF00355) | Paracoccus denitrificans PD1222 | |
| 22 | CA, Y (g, k) | Cytochrome c oxidase subunit 1 | polymer | 558 | 62486.6 | 2 | UniProt (A1B3D7) Pfam (PF00115) | Paracoccus denitrificans PD1222 | |
| 23 | DA, Z (h, l) | Cytochrome c oxidase subunit 2 | polymer | 298 | 32563.6 | 2 | UniProt (A1BA41) Pfam (PF02790) Pfam (PF00116) | Paracoccus denitrificans PD1222 | |
| 24 | AA, EA (i, m) | cytochrome-c oxidase | polymer | 274 | 30833.2 | 2 | UniProt (A1BA37) Pfam (PF00510) | Paracoccus denitrificans PD1222 | Cytochrome aa3 subunit 3,Cytochrome c oxidase polypeptide III |
| 25 | BA, FA (j, n) | Aa3 type cytochrome c oxidase subunit IV | polymer | 66 | 7351.5 | 2 | UniProt (A1AZ52) Pfam (PF07835) | Paracoccus denitrificans PD1222 | |
| 26 | GA, HA (o, p) | Cytochrome c, class I | polymer | 176 | 18177.4 | 2 | UniProt (A1B311) Pfam (PF00034) | Paracoccus denitrificans PD1222 | |
| 27 | IA (q) | NADH:ubiquinone oxidoreductase 17.2 kD subunit | polymer | 124 | 14460.9 | 1 | UniProt (A1B1H8) Pfam (PF05071) | Paracoccus denitrificans PD1222 | |
| 28 | JA (r) | Transmembrane helix of unknown identity | polymer | 35 | 2996.7 | 1 | Paracoccus denitrificans PD1222 | ||
| 29 | KA (s) | Transmembrane helix of unknown identity | polymer | 30 | 2571.2 | 1 | Paracoccus denitrificans PD1222 | ||
| 30 | LA (t) | cytochrome-c oxidase | polymer | 539 | 60042.1 | 1 | UniProt (A1B351) Pfam (PF00115) | Paracoccus denitrificans PD1222 | |
| 31 | MA (u) | Cytochrome c oxidase, cbb3-type, subunit II | polymer | 241 | 27362.1 | 1 | UniProt (A1B350) Pfam (PF02433) | Paracoccus denitrificans PD1222 | |
| 32 | NA (v) | Cbb3-type cytochrome c oxidase subunit CcoP | polymer | 349 | 37597.5 | 1 | UniProt (A1B348) Pfam (PF14715) Pfam (PF13442) | Paracoccus denitrificans PD1222 | Cbb3-Cox subunit CcoP,C-type cytochrome CcoP,Cyt c(P),Cytochrome c oxidase subunit III |
| 33 | OA, RA, TA, UA, YA... (B, F, G, I) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 6 | Chemie (SF4) | |||
| 34 | PA (D) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 35 | JB, QA, RB, VA (c, E, f, G) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 4 | Chemie (FES) | |||
| 36 | SA (F) | FLAVIN MONONUCLEOTIDE | non-polymer | 456.3 | 1 | Chemie (FMN) | |||
| 37 | AB, QB, WA (N, f, H) | 2-[2-[(1~{S},2~{S},4~{S},5'~{R},6~{R},7~{S},8~{R},9~{S},12~{S},13~{R},16~{S})-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icos-18-ene-6,2'-oxane]-16-yl]oxyethyl]propane-1,3-diol | non-polymer | 516.8 | 3 | Chemie (DU0) | |||
| 38 | DB, FB, KB, NB, XA (a, d, H) | UBIQUINONE-10 | non-polymer | 863.3 | 5 | Chemie (U10) | |||
| 39 | BB (R) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 40 | CB (a) | CARDIOLIPIN | non-polymer | 1464.0 | 1 | Chemie (CDL) | |||
| 41 | EB, EC, FC, GB, LB... (a, t, d) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 6 | Chemie (HEM) | |||
| 42 | BC, GC, HB, HC, OB... (k, t, b, e, g) | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
| 43 | IB, IC, JC, KC, PB (b, u, v, e) | HEME C | non-polymer | 618.5 | 5 | Chemie (HEC) | |||
| 44 | TB, UB, YB, ZB (g, k) | HEME-A | non-polymer | 852.8 | 4 | Chemie (HEA) | |||
| 45 | AC, DC, VB (k, t, g) | COPPER (II) ION | non-polymer | 63.5 | 3 | Chemie (CU) | |||
| 46 | WB (g) | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 47 | CC, XB (l, h) | DINUCLEAR COPPER ION | non-polymer | 127.1 | 2 | Chemie (CUA) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 40 |
| Total formula weight | 1289779.1 | |
| Non-Polymers* | Number of molecules | 49 |
| Total formula weight | 21631.9 | |
| All* | Total formula weight | 1311411.0 |
