9G6K
LSU structure derived from the LSU sample of the mitoribosome from T. gondii.
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (L0) | RRM domain-containing protein | polymer | 405 | 47857.1 | 1 | UniProt (S8F7E5) | Toxoplasma gondii | |
| 2 | B (L1) | Large ribosomal subunit protein mL54 | polymer | 92 | 10873.6 | 1 | UniProt (S8F6A8) Pfam (PF08561) | Toxoplasma gondii | |
| 3 | C (L2) | mL162 | polymer | 270 | 30027.4 | 1 | UniProt (A0A0F7V439) | Toxoplasma gondii | |
| 4 | D (L3) | Ribosomal l25 family protein | polymer | 331 | 37394.5 | 1 | UniProt (S8ER88) | Toxoplasma gondii | |
| 5 | E (L4) | RAP domain-containing protein | polymer | 430 | 49298.8 | 1 | UniProt (S8G8G0) | Toxoplasma gondii | |
| 6 | F (L5) | mL183 | polymer | 30 | 3787.6 | 1 | UniProt (by SIFTS) (S8F1F9) | Toxoplasma gondii | |
| 7 | G (L6) | uL1m | polymer | 57 | 6736.0 | 1 | UniProt (by SIFTS) (A0A2T6IV06) | Toxoplasma gondii | |
| 8 | H (L7) | uL14m | polymer | 114 | 12981.5 | 1 | Pfam (PF00238) UniProt (by SIFTS) (A0A125YQP1) | Toxoplasma gondii | |
| 9 | I (L8) | Putative 50S ribosomal protein L17 | polymer | 246 | 29244.5 | 1 | UniProt (A0A7J6KEY9) Pfam (PF01196) UniProt (by SIFTS) (A0A125YFY0) | Toxoplasma gondii | |
| 10 | J (L9) | DUF6832 domain-containing protein | polymer | 475 | 55084.5 | 1 | UniProt (A0A7J6KC93) Pfam (PF20725) Pfam (PF20724) UniProt (by SIFTS) (A0A125YNS5) | Toxoplasma gondii | |
| 11 | K (LA) | Putative 50S ribosomal protein L13 | polymer | 217 | 24255.3 | 1 | UniProt (A0A7J6K0U2) Pfam (PF00572) UniProt (by SIFTS) (A0A125YJY5) | Toxoplasma gondii | |
| 12 | L (LB) | Putative ribosomal protein L20 | polymer | 121 | 14651.1 | 1 | UniProt (B9PY19) Pfam (PF00453) UniProt (by SIFTS) (A0A125YU12) | Toxoplasma gondii | |
| 13 | M (LC) | Macro domain-containing protein | polymer | 527 | 57139.9 | 1 | UniProt (S8GAV7) Pfam (PF01661) | Toxoplasma gondii | |
| 14 | N (LD) | Ribosomal protein L46 | polymer | 282 | 32456.9 | 1 | UniProt (S8EWD8) | Toxoplasma gondii | |
| 15 | O (LE) | FAS1 domain-containing protein | polymer | 338 | 37960.8 | 1 | UniProt (S8F814) | Toxoplasma gondii | |
| 16 | P (LF) | bL36m | polymer | 88 | 10376.2 | 1 | UniProt (A0A7J6KFA2) UniProt (by SIFTS) (S8GJM3) | Toxoplasma gondii | |
| 17 | Q (LG) | Ribosomal protein RPL22 | polymer | 148 | 17693.2 | 1 | UniProt (A0A7J6JUA9) | Toxoplasma gondii | |
| 18 | R (LH) | Ribosomal protein L9, N-terminal domain-containing protein | polymer | 87 | 9818.4 | 1 | UniProt (S8G4D4) Pfam (PF01281) | Toxoplasma gondii | |
| 19 | S (LI) | Putative 60S ribosomal protein L27 | polymer | 79 | 8731.5 | 1 | UniProt (A0A7J6JYF7) Pfam (PF09809) UniProt (by SIFTS) (A0A125YTD0) | Toxoplasma gondii | |
| 20 | T (LJ) | RAP domain-containing protein | polymer | 443 | 51733.0 | 1 | UniProt (A0A7J6K2J1) Pfam (PF08373) UniProt (by SIFTS) (A0A125YNK1) | Toxoplasma gondii | |
| 21 | U (LK) | BIR protein | polymer | 219 | 26967.8 | 1 | UniProt (A0A7J6K0B0) UniProt (by SIFTS) (S8GF62) | Toxoplasma gondii | |
| 22 | V (LL) | AMP-dependent synthetase/ligase domain-containing protein | polymer | 855 | 92873.2 | 1 | UniProt (S8F8W6) | Toxoplasma gondii | |
| 23 | W (LM) | Large ribosomal subunit protein uL11m | polymer | 177 | 19700.1 | 1 | UniProt (A0A125YTN1) Pfam (PF03946) Pfam (PF00298) | Toxoplasma gondii | |
| 24 | X (LN) | bL35m | polymer | 113 | 13974.4 | 1 | UniProt (A0A7J6KEG8) UniProt (by SIFTS) (A0A125YU18) | Toxoplasma gondii | |
| 25 | Y (LO) | LSU ribosomal protein L2P, putative | polymer | 344 | 37607.5 | 1 | UniProt (S8F793) Pfam (PF00181) Pfam (PF03947) | Toxoplasma gondii | |
| 26 | Z (LP) | Peptidyl-prolyl cis-trans isomerase | polymer | 230 | 26422.1 | 1 | UniProt (S8FB56) Pfam (PF00160) | Toxoplasma gondii | PPIase |
| 27 | AA (LQ) | mL175 | polymer | 70 | 8480.8 | 1 | UniProt (Q1JTA3) UniProt (by SIFTS) (A0A125YKA8) | Toxoplasma gondii | |
| 28 | BA (LR) | mL172 | polymer | 132 | 15187.0 | 1 | UniProt (A0A7J6KA70) UniProt (by SIFTS) (A0A125YZ59) | Toxoplasma gondii | |
| 29 | CA (LS) | Large ribosomal subunit protein uL24c | polymer | 228 | 25840.3 | 1 | UniProt (A0A125YMH9) Pfam (PF00467) Pfam (PF17136) | Toxoplasma gondii | |
| 30 | DA (LT) | Putative 50S ribosomal protein L33 | polymer | 117 | 14149.6 | 1 | UniProt (A0A7J6JWI3) Pfam (PF00471) UniProt (by SIFTS) (A0A125YRM7) | Toxoplasma gondii | |
| 31 | EA (LU) | Large ribosomal subunit protein mL49 | polymer | 79 | 8876.5 | 1 | UniProt (A0A7J6JUD4) Pfam (PF05046) UniProt (by SIFTS) (A0A125YX92) | Toxoplasma gondii | |
| 32 | FA (LV) | mL148 | polymer | 880 | 96131.0 | 1 | UniProt (S8EU00) | Toxoplasma gondii | |
| 33 | GA (LW) | Putative 50S ribosomal protein L3 | polymer | 306 | 34639.1 | 1 | UniProt (A0A7J6K2F9) Pfam (PF00297) UniProt (by SIFTS) (A0A125YKW9) | Toxoplasma gondii | |
| 34 | HA (LX) | mL176 | polymer | 92 | 11108.6 | 1 | UniProt (A0A7J6K9K6) UniProt (by SIFTS) (S8FBX6) | Toxoplasma gondii | |
| 35 | IA (LY) | Ribosomal L22p/L17e protein | polymer | 346 | 41243.0 | 1 | UniProt (A0A7J6K2Q7) UniProt (by SIFTS) (S8F1I2) | Toxoplasma gondii | |
| 36 | JA (LZ) | mL174 | polymer | 197 | 22605.2 | 1 | UniProt (A0A125YYR6) | Toxoplasma gondii | |
| 37 | KA (La) | Large ribosomal subunit protein uL23m | polymer | 214 | 25045.1 | 1 | UniProt (A0A7J6K299) Pfam (PF00276) UniProt (by SIFTS) (A0A125YSK9) | Toxoplasma gondii | |
| 38 | LA (Lb) | RAP domain-containing protein | polymer | 733 | 83547.7 | 1 | UniProt (S8F6E9) | Toxoplasma gondii | |
| 39 | MA (Lc) | RAP domain-containing protein | polymer | 512 | 58330.2 | 1 | UniProt (S8EW79) | Toxoplasma gondii | |
| 40 | NA (Ld) | RAP domain-containing protein | polymer | 437 | 49907.6 | 1 | UniProt (S8EW79) | Toxoplasma gondii | |
| 41 | OA (Le) | RAP domain-containing protein | polymer | 376 | 43435.8 | 1 | UniProt (S8GIP4) | Toxoplasma gondii | |
| 42 | PA (Lf) | HECT-domain (Ubiquitin-transferase) domain-containing protein | polymer | 226 | 25178.9 | 1 | UniProt (S8GMU2) | Toxoplasma gondii | |
| 43 | QA (Lg) | Large ribosomal subunit protein uL29m | polymer | 214 | 25977.3 | 1 | UniProt (A0A7J6K1F8) Pfam (PF06984) UniProt (by SIFTS) (A0A125YVS8) | Toxoplasma gondii | |
| 44 | RA (Lh) | Large ribosomal subunit protein uL4m | polymer | 464 | 54296.1 | 1 | UniProt (A0A7J6JZZ1) Pfam (PF00573) UniProt (by SIFTS) (S8EX11) | Toxoplasma gondii | |
| 45 | SA (Li) | RAP domain-containing protein | polymer | 602 | 67893.9 | 1 | UniProt (S8FC14) Pfam (PF08373) | Toxoplasma gondii | |
| 46 | TA (Lj) | mL177 | polymer | 122 | 13903.1 | 1 | UniProt (A0A7J6JV70) UniProt (by SIFTS) (A0A125YYH1) | Toxoplasma gondii | |
| 47 | UA (Lk) | AP2 domain transcription factor AP2VIIb-2 | polymer | 184 | 21280.5 | 1 | UniProt (A0A7J6K291) UniProt (by SIFTS) (S8F1K6) | Toxoplasma gondii | |
| 48 | VA (Ll) | Large ribosomal subunit protein mL43 | polymer | 190 | 22268.6 | 1 | UniProt (A0A7J6KC95) UniProt (by SIFTS) (A0A125YVS1) | Toxoplasma gondii | |
| 49 | WA (Lm) | Large ribosomal subunit protein uL24c | polymer | 189 | 22014.5 | 1 | UniProt (A0A7J6JXG2) Pfam (PF17136) UniProt (by SIFTS) (A0A125YTV4) | Toxoplasma gondii | |
| 50 | XA (Ln) | mL185 | polymer | 60 | 6289.1 | 1 | UniProt (S8G210) | Toxoplasma gondii | |
| 51 | YA (Lo) | Transmembrane protein | polymer | 283 | 31526.2 | 1 | UniProt (A0A7J6KAS3) UniProt (by SIFTS) (S8G7J3) | Toxoplasma gondii | |
| 52 | ZA (Lp) | bL19m | polymer | 368 | 43663.9 | 1 | Pfam (PF01245) UniProt (by SIFTS) (S8GBY9) | Toxoplasma gondii | |
| 53 | AB (Lq) | RAP domain-containing protein | polymer | 787 | 85917.8 | 1 | UniProt (S8EQ41) | Toxoplasma gondii | |
| 54 | BB (Lr) | Putative ribosomal protein L28 | polymer | 281 | 33213.9 | 1 | UniProt (A0A7J6K129) UniProt (by SIFTS) (A0A125YXA5) | Toxoplasma gondii | |
| 55 | CB (Ls) | Ribosomal protein L15, putative | polymer | 311 | 36395.1 | 1 | UniProt (S8GIU7) Pfam (PF00828) | Toxoplasma gondii | |
| 56 | DB (Lt) | mL40 | polymer | 240 | 27113.6 | 1 | UniProt (A0A7J6KCG7) UniProt (by SIFTS) (S8F2D4) | Toxoplasma gondii | |
| 57 | EB (Lu) | mL164 | polymer | 232 | 26163.0 | 1 | UniProt (by SIFTS) (A0A125YRP8) | Toxoplasma gondii | |
| 58 | FB (Lv) | mL180 | polymer | 112 | 13209.5 | 1 | UniProt (A0A7J6JZI4) UniProt (by SIFTS) (A0A125YKH4) | Toxoplasma gondii | |
| 59 | GB (Lw) | Putative 50S ribosomal protein L16 | polymer | 179 | 20393.7 | 1 | UniProt (A0A7J6K7Z7) Pfam (PF00252) UniProt (by SIFTS) (A0A125YNI9) | Toxoplasma gondii | |
| 60 | HB (Lx) | mL173 | polymer | 98 | 11371.3 | 1 | UniProt (A0A7J6KAH2) UniProt (by SIFTS) (S8G7B2) | Toxoplasma gondii | |
| 61 | IB (Ly) | Large ribosomal subunit protein bL21m | polymer | 404 | 47176.8 | 1 | UniProt (A0A7J6K7U7) Pfam (PF00829) UniProt (by SIFTS) (S8F9B8) | Toxoplasma gondii | |
| 62 | JB (Lz) | mL182 | polymer | 120 | 14083.6 | 1 | Pfam (PF00076) UniProt (by SIFTS) (A0A125YVN6) | Toxoplasma gondii | |
| 63 | KB (UA) | mL178 | polymer | 85 | 10027.9 | 1 | UniProt (A0A7J6KDX2) UniProt (by SIFTS) (S8FAF6) | Toxoplasma gondii | |
| 64 | LB (UB) | bL27m | polymer | 174 | 20579.8 | 1 | UniProt (A0A7J6K1X2) Pfam (PF01016) UniProt (by SIFTS) (S8GME4) | Toxoplasma gondii | |
| 65 | MB (UC) | mL179 | polymer | 105 | 12288.6 | 1 | UniProt (by SIFTS) (S8EXG3) | Toxoplasma gondii | |
| 66 | NB (UD) | Transmembrane protein | polymer | 35 | 4380.2 | 1 | UniProt (A0A7J6K730) UniProt (by SIFTS) (A0A125YKV7) | Toxoplasma gondii | |
| 67 | OB (UE) | mL53 | polymer | 113 | 13313.3 | 1 | UniProt (A0A7J6JX69) UniProt (by SIFTS) (S8G1Y9) | Toxoplasma gondii | |
| 68 | PB (UF) | bL32m | polymer | 78 | 9467.0 | 1 | UniProt (A0A7J6K9L3) UniProt (by SIFTS) (A0A125YQ85) | Toxoplasma gondii | |
| 69 | QB (UG) | AP2 domain transcription factor AP2IV-1 | polymer | 158 | 19040.8 | 1 | UniProt (A0A7J6KEE5) Pfam (PF00847) UniProt (by SIFTS) (S8GSN6) | Toxoplasma gondii | |
| 70 | RB (UH) | mL181 | polymer | 47 | 5741.8 | 1 | Toxoplasma gondii | ||
| 71 | SB (UI) | mL184 | polymer | 35 | 4226.1 | 1 | UniProt (A0A0F7V869) | Toxoplasma gondii | |
| 72 | TB (l0) | RNA23t | polymer | 44 | 14103.5 | 1 | Toxoplasma gondii | ||
| 73 | UB (l1) | RNA29 | polymer | 50 | 16107.6 | 1 | Toxoplasma gondii | ||
| 74 | VB (l2) | LSUB | polymer | 31 | 9946.9 | 1 | Toxoplasma gondii | ||
| 75 | WB (l3) | RNA6 | polymer | 59 | 18903.3 | 1 | Toxoplasma gondii | ||
| 76 | XB (l4) | RNA1 | polymer | 94 | 30072.8 | 1 | Toxoplasma gondii | ||
| 77 | YB (l5) | RNA31 | polymer | 36 | 11474.8 | 1 | Toxoplasma gondii | ||
| 78 | ZB (l6) | RNA14 | polymer | 50 | 16141.8 | 1 | Toxoplasma gondii | ||
| 79 | AC (l7) | RNA11 | polymer | 69 | 22303.4 | 1 | Toxoplasma gondii | ||
| 80 | BC (l8) | RNA36 | polymer | 33 | 10631.5 | 1 | Toxoplasma gondii | ||
| 81 | CC (l9) | RNA3 | polymer | 91 | 29090.2 | 1 | Toxoplasma gondii | ||
| 82 | DC (lA) | RNA2 | polymer | 65 | 20904.5 | 1 | Toxoplasma gondii | ||
| 83 | EC (lB) | RNA38 | polymer | 45 | 14798.9 | 1 | Toxoplasma gondii | ||
| 84 | FC (lC) | RNA35 | polymer | 27 | 8744.3 | 1 | Toxoplasma gondii | ||
| 85 | GC (lD) | RNA32 | polymer | 16 | 5058.1 | 1 | Toxoplasma gondii | ||
| 86 | HC (lE) | RNA15 | polymer | 29 | 9490.7 | 1 | Toxoplasma gondii | ||
| 87 | IC (lF) | RNA10 | polymer | 88 | 28356.8 | 1 | Toxoplasma gondii | ||
| 88 | JC (lG) | LSUC | polymer | 26 | 8406.1 | 1 | Toxoplasma gondii | ||
| 89 | KC (lH) | RNA16 | polymer | 27 | 8614.1 | 1 | Toxoplasma gondii | ||
| 90 | LC (lI) | RNA13 | polymer | 48 | 15628.5 | 1 | Toxoplasma gondii | ||
| 91 | MC (lJ) | LSUD/E | polymer | 279 | 89620.8 | 1 | Toxoplasma gondii | ||
| 92 | NC (lK) | SSUF | polymer | 38 | 12351.4 | 1 | Toxoplasma gondii | ||
| 93 | OC (lL) | RNA7 | polymer | 91 | 29367.5 | 1 | Toxoplasma gondii | ||
| 94 | PC (lM) | LSUF/G | polymer | 194 | 62298.7 | 1 | Toxoplasma gondii | ||
| 95 | QC (lN) | RNA37 | polymer | 62 | 19888.8 | 1 | Toxoplasma gondii | ||
| 96 | RC (lO) | LSUA | polymer | 180 | 57982.4 | 1 | Toxoplasma gondii | ||
| 97 | SC (lP) | ulr1 | polymer | 29 | 8833.9 | 1 | Toxoplasma gondii | ||
| 98 | TC (lQ) | ulr2 | polymer | 37 | 11283.2 | 1 | Toxoplasma gondii | ||
| 99 | UC (lR) | ulr3 | polymer | 28 | 8527.7 | 1 | Toxoplasma gondii | ||
| 100 | VC (lS) | ulr4 | polymer | 7 | 2098.2 | 1 | Toxoplasma gondii | ||
| 101 | WC, ZC (lT, lW) | ulr5 | polymer | 14 | 4241.4 | 2 | Toxoplasma gondii | ||
| 102 | XC (lU) | ulr6 | polymer | 15 | 4547.5 | 1 | Toxoplasma gondii | ||
| 103 | BD, YC (lV, lY) | ulr7,ulr8 | polymer | 10 | 3016.7 | 2 | Toxoplasma gondii | ||
| 104 | AD (lX) | ulr9 | polymer | 58 | 17712.7 | 1 | Toxoplasma gondii |
Sequence modifications
Le: 263 - 639 (UniProt: S8GIP4)
Ln: 130 - 189 (UniProt: S8G210)
| PDB | External Database | Details |
|---|---|---|
| - | Leu 268 | deletion |
| PDB | External Database | Details |
|---|---|---|
| - | Ser 166 | deletion |
| - | Ala 167 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 106 |
| Total formula weight | 2690377.1 | |
| All* | Total formula weight | 2690377.1 |
