9G06
Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | Small ribosomal subunit protein uS3 | polymer | 233 | 26031.3 | 1 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) | Escherichia coli | 30S ribosomal protein S3 |
| 2 | B (D) | Small ribosomal subunit protein uS4 | polymer | 206 | 23514.2 | 1 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) | Escherichia coli | 30S ribosomal protein S4 |
| 3 | C (E) | Small ribosomal subunit protein uS5 | polymer | 167 | 17629.4 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) | Escherichia coli | 30S ribosomal protein S5 |
| 4 | D (F) | Small ribosomal subunit protein bS6, fully modified isoform | polymer | 135 | 15727.5 | 1 | UniProt (P02358) Pfam (PF01250) | Escherichia coli | |
| 5 | E (H) | Small ribosomal subunit protein uS8 | polymer | 130 | 14146.6 | 1 | UniProt (P0A7W7) Pfam (PF00410) | Escherichia coli | 30S ribosomal protein S8 |
| 6 | F (I) | Translation initiation factor IF-1 | polymer | 72 | 8262.6 | 1 | UniProt (P69222) Pfam (PF01176) | Escherichia coli | |
| 7 | G (J) | Translation initiation factor IF-3 | polymer | 180 | 20601.0 | 1 | UniProt (P0A707) Pfam (PF05198) Pfam (PF00707) | Escherichia coli | |
| 8 | H (K) | Small ribosomal subunit protein uS11 | polymer | 159 | 17422.5 | 1 | UniProt (P0A7R9) Pfam (PF00411) | Escherichia coli | 30S ribosomal protein S11 |
| 9 | I (L) | Small ribosomal subunit protein uS12 | polymer | 124 | 13814.2 | 1 | UniProt (P0A7S3) Pfam (PF00164) | Escherichia coli | 30S ribosomal protein S12 |
| 10 | J (M) | Small ribosomal subunit protein uS13 | polymer | 118 | 13128.5 | 1 | UniProt (P0A7S9) Pfam (PF00416) | Escherichia coli | 30S ribosomal protein S13 |
| 11 | K (N) | Small ribosomal subunit protein uS14 | polymer | 101 | 11606.6 | 1 | UniProt (P0AG59) Pfam (PF00253) | Escherichia coli | 30S ribosomal protein S14 |
| 12 | L (O) | Small ribosomal subunit protein uS15 | polymer | 89 | 10290.8 | 1 | UniProt (P0ADZ4) Pfam (PF00312) | Escherichia coli | 30S ribosomal protein S15 |
| 13 | M (P) | Small ribosomal subunit protein bS16 | polymer | 82 | 9207.6 | 1 | UniProt (P0A7T3) Pfam (PF00886) | Escherichia coli | 30S ribosomal protein S16 |
| 14 | N (Q) | Small ribosomal subunit protein uS17 | polymer | 84 | 9724.5 | 1 | UniProt (P0AG63) Pfam (PF00366) | Escherichia coli | 30S ribosomal protein S17 |
| 15 | O (R) | Small ribosomal subunit protein bS18 | polymer | 75 | 9005.5 | 1 | UniProt (P0A7T7) Pfam (PF01084) | Escherichia coli | 30S ribosomal protein S18 |
| 16 | P (S) | Small ribosomal subunit protein uS19 | polymer | 92 | 10455.4 | 1 | UniProt (P0A7U3) Pfam (PF00203) | Escherichia coli | 30S ribosomal protein S19 |
| 17 | Q (T) | Small ribosomal subunit protein bS20 | polymer | 87 | 9708.5 | 1 | UniProt (P0A7U7) Pfam (PF01649) | Escherichia coli | 30S ribosomal protein S20 |
| 18 | R (U) | Small ribosomal subunit protein bS21 | polymer | 71 | 8524.0 | 1 | UniProt (P68679) Pfam (PF01165) | Escherichia coli | 30S ribosomal protein S21 |
| 19 | S (Y) | mRNA | polymer | 40 | 13074.9 | 1 | Escherichia coli | ||
| 20 | T (b) | Small ribosomal subunit protein uS9 | polymer | 130 | 14886.3 | 1 | UniProt (P0A7X3) Pfam (PF00380) | Escherichia coli | 30S ribosomal protein S9 |
| 21 | U (B) | 16S ribosomal RNA | polymer | 1545 | 500797.1 | 1 | Escherichia coli | ||
| 22 | V (a) | fMet-tRNA | polymer | 73 | 23581.1 | 1 | Escherichia coli | ||
| 23 | W (G) | Small ribosomal subunit protein uS7 | polymer | 179 | 20055.2 | 1 | UniProt (P02359) Pfam (PF00177) | Escherichia coli | 30S ribosomal protein S7 |
| 24 | X (c) | Small ribosomal subunit protein uS10 | polymer | 103 | 11755.6 | 1 | UniProt (P0A7R5) Pfam (PF00338) | Escherichia coli | 30S ribosomal protein S10,Transcription termination/antitermination protein NusE |
| 25 | AA, BA, DA, EA, FA... (B, D, F) | POTASSIUM ION | non-polymer | 39.1 | 25 | Chemie (K) | |||
| 26 | AB, AC, BB, BC, CA... (B) | MAGNESIUM ION | non-polymer | 24.3 | 49 | Chemie (MG) | |||
| 27 | UC (B) | (2S,3S)-2-[[(2S)-2-[[(2S,4S)-5-aminocarbonyloxy-4-oxidanyl-2-[[(2S,3R)-3-oxidanylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-3-(1H-imidazol-4-yl)propanoyl]amino]-3-(2-chloranyl-1H-imidazol-4-yl)-3-oxidanyl-propanoic acid | non-polymer | 644.0 | 1 | Chemie (A1IC4) | |||
| 28 | AD, BD, CD, DD, ED... (K, L, O, P, Q...) | water | water | 18.0 | 1807 | Chemie (HOH) |
Sequence modifications
K: 1 - 129 (UniProt: P0A7R9)
| PDB | External Database | Details |
|---|---|---|
| Ias 119 | Asn 119 | conflict |
| Gly 130 | - | expression tag |
| Cys 131 | - | expression tag |
| Arg 132 | - | expression tag |
| Pro 133 | - | expression tag |
| Pro 134 | - | expression tag |
| Lys 135 | - | expression tag |
| Lys 136 | - | expression tag |
| Arg 137 | - | expression tag |
| Arg 138 | - | expression tag |
| Val 139 | - | expression tag |
| Gly 140 | - | expression tag |
| Cys 141 | - | expression tag |
| Arg 142 | - | expression tag |
| Pro 143 | - | expression tag |
| Pro 144 | - | expression tag |
| Lys 145 | - | expression tag |
| Lys 146 | - | expression tag |
| Arg 147 | - | expression tag |
| Arg 148 | - | expression tag |
| Val 149 | - | expression tag |
| Gly 150 | - | expression tag |
| Cys 151 | - | expression tag |
| Arg 152 | - | expression tag |
| Pro 153 | - | expression tag |
| Pro 154 | - | expression tag |
| Lys 155 | - | expression tag |
| Lys 156 | - | expression tag |
| Arg 157 | - | expression tag |
| Arg 158 | - | expression tag |
| Val 159 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 24 |
| Total formula weight | 832950.5 | |
| Non-Polymers* | Number of molecules | 75 |
| Total formula weight | 2812.4 | |
| All* | Total formula weight | 835763.0 |
