9FZL

Perkinsus marinus respiratory supercomplex CII2CIII2CIV2 in an intermediate state

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, XA (2M, 2m)	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	polymer	604	65705.4	2		Perkinsus marinus
2	B, YA (2N, 2n)	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	polymer	259	29680.3	2		Perkinsus marinus
3	C, ZA (2O, 2o)	SDHG	polymer	160	17795.6	2	UniProt (C5KTH2)	Perkinsus marinus
4	AB, D (2P, 2p)	Transmembrane protein	polymer	158	18583.9	2		Perkinsus marinus
5	BB, E (2Q, 2q)	Kinesin-like protein	polymer	69	8005.3	2		Perkinsus marinus
6	CB, F (2R, 2r)	SDHH	polymer	117	13456.6	2		Perkinsus marinus
7	DB, G (2S, 2s)	DUF6827 domain-containing protein	polymer	165	18889.3	2	UniProt (C5L1Y6)	Perkinsus marinus	SDHE
8	EB, H (2T, 2t)	Rab-GAP TBC domain-containing protein	polymer	82	9878.2	2		Perkinsus marinus
9	FB, I (2U, 2u)	Syntaxin-1A	polymer	48	5534.1	2		Perkinsus marinus
10	GB, J (2V, 2v)	SDHI	polymer	87	10148.9	2	UniProt (C5LCL6)	Perkinsus marinus
11	HB, K (3A, 3a)	Mitochondrial processing peptidase beta subunit	polymer	454	51513.8	2		Perkinsus marinus
12	IB, L (3B, 3b)	Alpha-MPP	polymer	496	55322.8	2		Perkinsus marinus
13	JB, M (3C, 3c)	Iso-1-cytochrome c	polymer	241	27275.7	2	UniProt (C5K8N0)	Perkinsus marinus	CytC1
14	KB, N (3D, 3d)	QCR8	polymer	95	11763.5	2	UniProt (C5L848)	Perkinsus marinus
15	LB, O (3E, 3e)	QCR9	polymer	92	11417.1	2		Perkinsus marinus
16	MB, P (3F, 3f)	QCR10	polymer	84	10329.9	2	UniProt (C5KTV6)	Perkinsus marinus
17	NB, Q (3G, 3g)	Cytochrome b	polymer	354	42452.5	2		Perkinsus marinus
18	OB, R (3H, 3h)	Ubiquinol-cytochrome c reductase, iron-sulfur subunit, putative	polymer	326	37320.4	2		Perkinsus marinus
19	PB, S (3I, 3i)	Ubiquinol-cytochrome C reductase complex 14kD subunit, putative	polymer	176	20940.1	2	UniProt (C5LWC5)	Perkinsus marinus	QCR7
20	QB, T (3J, 3j)	Ubiquinol-cytochrome c reductase complex 7.8 kDa protein, putative	polymer	92	10852.3	2	UniProt (C5L0W9)	Perkinsus marinus	QCR6
21	RB, U (3K, 3k)	Cu-binding protein	polymer	79	8656.1	2		Perkinsus marinus
22	SB, V (3L, 3l)	Aurora kinase	polymer	69	7794.0	2	UniProt (C5LDF5)	Perkinsus marinus
23	TB, W (40, 41)	Cytochrome c oxidase subunit 3	polymer	230	28167.9	2		Perkinsus marinus
24	UB, X (4A, 4a)	Cytochrome c oxidase subunit 6B	polymer	100	12040.4	2		Perkinsus marinus
25	VB, Y (4B, 4b)	Peptidase M14 carboxypeptidase A domain-containing protein	polymer	93	10475.3	2	UniProt (C5KED7)	Perkinsus marinus	COX36;Cytochrome c oxidase subunit 36
26	WB, Z (4C, 4c)	Cytochrome c oxidase subunit 40	polymer	75	8828.9	2	UniProt (C5L7H1)	Perkinsus marinus	COX40
27	AA, XB (4D, 4d)	Cytochrome c oxidase subunit 34	polymer	90	11072.6	2		Perkinsus marinus
28	BA, YB (4E, 4e)	Merozoite surface protein, putative	polymer	152	18761.6	2	UniProt (C5L0U1)	Perkinsus marinus	COX6A;Cytochrome c oxidase subunit 6A
29	CA, ZB (4F, 4f)	Ubiquitin, putative	polymer	73	8624.9	2	UniProt (C5KBY9)	Perkinsus marinus	COX39;Cytochrome c oxidase subunit 39
30	AC, DA (4G, 4g)	Cytochrome c oxidase subunit 33	polymer	100	12070.7	2	UniProt (C5KJE7)	Perkinsus marinus	COX33
31	BC, EA (4H, 4h)	Cytochrome c oxidase subunit 30	polymer	141	15973.0	2		Perkinsus marinus
32	CC, FA (4I, 4i)	Cytochrome c oxidase subunit 6C	polymer	196	23967.1	2	UniProt (C5LPW2)	Perkinsus marinus	COX6C
33	DC, GA (4J, 4j)	Cytochrome c oxidase subunit 24	polymer	186	21376.3	2		Perkinsus marinus
34	EC, HA (4K, 4k)	Cytochrome c oxidase subunit 37	polymer	93	10228.1	2	UniProt (C5KST9)	Perkinsus marinus	COX37
35	FC, IA (4L, 4l)	Cytochrome c oxidase subunit 7A	polymer	122	15282.6	2	UniProt (C5KPD1)	Perkinsus marinus	COX7A
36	GC, JA (4M, 4m)	Cytochrome c oxidase subunit 35	polymer	98	10932.7	2	UniProt (C5LDS7)	Perkinsus marinus	COX35
37	HC, KA (4N, 4n)	Cytochrome c oxidase polypeptide II	polymer	131	14594.8	2	UniProt (C5LND1)	Perkinsus marinus	COX2B;Cytochrome c oxidase subunit 2B
38	IC, LA (4O, 4o)	GINS subunit domain-containing protein	polymer	47	5427.3	2	UniProt (C5LG07)	Perkinsus marinus	COX2C;Cytochrome c oxidase subunit 2C
39	JC, MA (4P, 4p)	Cytochrome c oxidase subunit 2A	polymer	180	21273.1	2		Perkinsus marinus
40	KC, NA (4Q, 4q)	Cytochrome c oxidase subunit 1	polymer	459	52063.5	2		Perkinsus marinus
41	LC, OA (4R, 4r)	Cytochrome c oxidase subunit 32	polymer	103	12904.8	2	UniProt (C5KSX3)	Perkinsus marinus	COX32
42	MC, PA (4S, 4s)	Cytochrome c oxidase subunit 7C	polymer	65	7711.7	2	UniProt (C5LPK3)	Perkinsus marinus	COX7C
43	NC, QA (4T, 4t)	Cytochrome c oxidase subunit 13	polymer	121	14002.0	2		Perkinsus marinus
44	OC, RA (4U, 4u)	Amino acid transporter transmembrane domain-containing protein	polymer	91	10665.1	2	UniProt (C5LG64)	Perkinsus marinus	COX38;Cytochrome c oxidase subunit 38
45	PC, SA (4V, 4v)	Cytochrome c oxidase subunit 4	polymer	185	21719.8	2		Perkinsus marinus
46	QC, TA (4W, 4w)	Cytochrome c oxidase subunit 19	polymer	141	16881.5	2	UniProt (C5L0W2)	Perkinsus marinus	COX19
47	RC, UA (4X, 4x)	Cytochrome Coxidase subunit, putative	polymer	226	26522.1	2		Perkinsus marinus
48	SC, VA (4Y, 4y)	Cytochrome c oxidase subunit 18	polymer	107	12898.2	2		Perkinsus marinus
49	TC, WA (4Z, 4z)	Cytochrome c oxidase subunit 31	polymer	186	22296.6	2		Perkinsus marinus
50	UC, XF (2M, 2m)	FLAVIN-ADENINE DINUCLEOTIDE	non-polymer		785.5	2	Chemie (FAD)
51	DE, GH, VC, YF (3H, 3h, 2N, 2n)	FE2/S2 (INORGANIC) CLUSTER	non-polymer		175.8	4	Chemie (FES)
52	WC, ZF (2N, 2n)	IRON/SULFUR CLUSTER	non-polymer		351.6	2	Chemie (SF4)
53	AG, XC (2n, 2N)	FE3-S4 CLUSTER	non-polymer		295.8	2	Chemie (F3S)
54	BG, CF, FI, YC (2n, 4Q, 4q, 2N)	POTASSIUM ION	non-polymer		39.1	4	Chemie (K)
55	AH, DG, ED, FD, HG... (3f, 2o, 2P, 2p, 2R...)	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine	non-polymer		744.0	32	Chemie (PEE)
56	AD, BD, EG, FE, FG... (2O, 2o, 3H, 2P, 3h...)	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE	non-polymer		790.1	18	Chemie (PC1)
57	AE, AI, BI, CD, CG... (3G, 4l, 4m, 2O, 2o...)	CARDIOLIPIN	non-polymer		1464.0	60	Chemie (CDL)
58	BE, CE, EH, FH, KD... (3G, 3g, 2S, 2s, 3D...)	Ubiquinone-8	non-polymer		727.1	8	Chemie (UQ8)
59	PD, SG (3C, 3c)	HEME C	non-polymer		618.5	2	Chemie (HEC)
60	BH, CH, YD, ZD (3g, 3G)	PROTOPORPHYRIN IX CONTAINING FE	non-polymer		616.5	4	Chemie (HEM)
61	OE, RH (40, 41)	Digitonin	non-polymer		1229.3	2	Chemie (AJP)
62	PE, RE, SH, UH (4C, 4D, 4c, 4d)	2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE	non-polymer		648.9	4	Chemie (LPP)
63	CI, ZE (4n, 4N)	DINUCLEAR COPPER ION	non-polymer		127.1	2	Chemie (CUA)
64	AF, DI (4Q, 4q)	COPPER (II) ION	non-polymer		63.5	2	Chemie (CU)
65	BF, EI (4Q, 4q)	MAGNESIUM ION	non-polymer		24.3	2	Chemie (MG)
66	DF, EF, GI, HI (4Q, 4q)	HEME-A	non-polymer		852.8	4	Chemie (HEA)
67	FF, II (4Q, 4q)	PEROXIDE ION	non-polymer		32.0	2	Chemie (PER)
68	NF, OF, QI, RI, UF... (4T, 4t, 4X, 4x)	ZINC ION	non-polymer		65.4	6	Chemie (ZN)

Contents of the asymmetric unit

Polymers	Number of chains	98
	Total formula weight	1880156.6
Non-Polymers*	Number of molecules	162
	Total formula weight	148471.6
All*	Total formula weight	2028628.2

*Water molecules are not included.