9FYA

Structure of the Sabia Virus spike complex in a closed conformation

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, C, D (a, c, b)	Glycoprotein G2	polymer	246	28552.5	3	UniProt (Q90037) Pfam (PF00798)	Sabia virus	GP2
2	B, E, F (A, C, B)	Glycoprotein G1	polymer	196	22594.7	3	UniProt (Q90037) Pfam (PF00798)	Sabia virus	GP1
3	G, L, N, O, T... (D, I, K, L, Q...)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	6	In PDB GlyTouCan (G42666HT)
4	H, J, P, R, V... (E, G, M, O, S...)	alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		910.8	6	In PDB GlyTouCan (G22768VO)
5	AA, I, K, M, Q... (X, F, H, J, N...)	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		586.5	9	In PDB GlyTouCan (G15407YE)
6	BA, CA, DA, FA, GA... (a, A, c, b, C...)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	12	Chemie (NAG)
7	EA (a)	ZINC ION	non-polymer		65.4	1	Chemie (ZN)
8	OA, PA, QA (a, c, b)	water	water		18.0	3	Chemie (HOH)

Sequence modifications

a, c, b: 255 - 488 (UniProt: Q90037)

PDB	External Database	Details
Gly 489	-	expression tag
Gly 490	-	expression tag
Gly 491	-	expression tag
Ser 492	-	expression tag
Asp 493	-	expression tag
Tyr 494	-	expression tag
Lys 495	-	expression tag
Asp 496	-	expression tag
Asp 497	-	expression tag
Asp 498	-	expression tag
Asp 499	-	expression tag
Lys 500	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	153441.8
Branched	Number of molecules	21
	Total formula weight	13290.2
Non-Polymers*	Number of molecules	13
	Total formula weight	2719.9
All*	Total formula weight	169451.9

*Water molecules are not included.