9FXW
Crystal Structure of Autotaxin (ENPP2) with Type VI Inhibitor, a Novel Class of Inhibitors with Three-Point Lock Binding Mode
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Isoform 2 of Autotaxin | polymer | 807 | 92875.4 | 1 | UniProt (Q64610) Pfam (PF01033) Pfam (PF01663) Pfam (PF01223) | Rattus norvegicus (Norway rat) | Ectonucleotide pyrophosphatase/phosphodiesterase family member 2,E-NPP 2,Extracellular lysophospholipase D,LysoPLD |
| 2 | B (B) | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G94626GC) | |||
| 3 | C, D (A) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 4 | E (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 5 | BB, CB, DB, EB, F... (A) | IODIDE ION | non-polymer | 126.9 | 15 | Chemie (IOD) | |||
| 6 | H (A) | N-(3-(3-((4-(4-fluorophenyl)thiazol-2-yl)(methyl)amino)-6-(1-(methylsulfonyl)piperidin-4-yl)imidazo[1,2-b]pyridazin-2-yl)propyl)-2-oxo-2,3-dihydrobenzo[d]oxazole-6-carboxamide | non-polymer | 704.8 | 1 | Chemie (A1IG0) | |||
| 7 | AB, BA, DA, EA, FB... (A) | THIOCYANATE ION | non-polymer | 58.1 | 30 | Chemie (SCN) | |||
| 8 | AA, CA, FA, GB, MA... (A) | GLYCEROL | non-polymer | 92.1 | 9 | Chemie (GOL) | |||
| 9 | IB (A) | water | water | 18.0 | 364 | Chemie (HOH) |
Sequence modifications
A: 56 - 862 (UniProt: Q64610)
| PDB | External Database | Details |
|---|---|---|
| Ala 410 | Asn 410 | engineered mutation |
| Thr 591 | Arg 591 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 92875.4 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 910.8 | |
| Non-Polymers* | Number of molecules | 58 |
| Total formula weight | 5350.6 | |
| All* | Total formula weight | 99136.8 |
