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9FDR

Crystal structure of human Sirt2 in apo form with opened selectivity pocket

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NAD-dependent protein deacetylase sirtuin-2polymer30434416.71UniProt (Q8IXJ6)
Pfam (PF02146)
Homo sapiens (human)Regulatory protein SIR2 homolog 2,SIR2-like protein 2
2B
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
3C, F, G
(A)
DIMETHYL SULFOXIDEnon-polymer78.13Chemie (DMS)
4D
(A)
TETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
5E
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
6H, I
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
7J
(A)
waterwater18.0320Chemie (HOH)
Sequence modifications
A: 56 - 356 (UniProt: Q8IXJ6)
PDBExternal DatabaseDetails
Gly 53-expression tag
His 54-expression tag
Met 55-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight34416.7
Non-Polymers*Number of molecules8
Total formula weight768.3
All*Total formula weight35185.1
*Water molecules are not included.

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PDB entries from 2025-06-18

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