9F62
Subtomogram average of the Chlamydomonas reinhardtii mitochondrial respirasome I2 III4 IV6
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, DD, ED (1A, 1B, 6A, 6B) | Cytochrome b | polymer | 381 | 42356.5 | 4 | UniProt (P23662) Pfam (PF00033) Pfam (PF00032) | Chlamydomonas reinhardtii | Complex III subunit 3,Complex III subunit III,Cytochrome b-c1 complex subunit 3,Ubiquinol-cytochrome-c reductase complex cytochrome b subunit |
| 2 | C, D, FD, GD (1C, 1D, 6C, 6D) | Cytochrome b-c1 complex subunit Rieske, mitochondrial | polymer | 262 | 28545.5 | 4 | UniProt (Q8HEB4) Pfam (PF02921) Pfam (PF00355) | Chlamydomonas reinhardtii | |
| 3 | E, F, HD, ID (1E, 1F, 6E, 6F) | Cytochrome c1 | polymer | 314 | 33868.2 | 4 | UniProt (Q9FQ96) Pfam (PF02167) | Chlamydomonas reinhardtii | |
| 4 | G, H, JD, KD (1G, 1H, 6G, 6H) | Complex III subunit 9 | polymer | 60 | 7040.2 | 4 | UniProt (A8JC51) Pfam (PF05365) | Chlamydomonas reinhardtii | |
| 5 | I, J, LD, MD (1I, 1J, 6I, 6J) | Cytochrome b-c1 complex subunit 6 | polymer | 69 | 7991.0 | 4 | UniProt (A8J8N9) Pfam (PF02320) | Chlamydomonas reinhardtii | |
| 6 | K, L, ND, OD (1K, 1L, 6K, 6L) | Mitochondrial ubiquinol-cytochrome c oxidoreductase subunit 8 | polymer | 73 | 8679.0 | 4 | UniProt (A8J7I9) Pfam (PF10890) | Chlamydomonas reinhardtii | |
| 7 | M, N, PD, QD (1M, 1N, 6M, 6N) | MPP-Beta | polymer | 495 | 55121.2 | 4 | UniProt (A8J5P7) Pfam (PF05193) Pfam (PF00675) | Chlamydomonas reinhardtii | |
| 8 | O, P, RD, SD (1O, 1P, 6O, 6P) | Mitochondrial ubiquinol-cytochrome c oxidoreductase subunit 10 | polymer | 59 | 6476.6 | 4 | UniProt (A8J4K5) | Chlamydomonas reinhardtii | |
| 9 | Q, S, TD, VD (1Q, 1S, 6Q, 6S) | Alpha-MPP | polymer | 485 | 49640.4 | 4 | UniProt (A8IKI9) Pfam (PF00675) Pfam (PF05193) | Chlamydomonas reinhardtii | |
| 10 | R, T, UD, WD (1R, 1T, 6R, 6T) | Cytochrome b-c1 complex subunit 7 | polymer | 123 | 14062.2 | 4 | UniProt (A8HX89) Pfam (PF02271) | Chlamydomonas reinhardtii | |
| 11 | GA, JE, SA, U, VE... (2A, 3A, 4A, 7A, 8A...) | Cytochrome c oxidase subunit 1 | polymer | 505 | 55194.9 | 6 | UniProt (P08681) Pfam (PF00115) | Chlamydomonas reinhardtii | Cytochrome c oxidase polypeptide I |
| 12 | HA, KE, TA, V, WE... (2B, 3B, 4B, 7B, 8B...) | Cytochrome c oxidase polypeptide II | polymer | 284 | 30716.7 | 6 | UniProt (Q9AU05) Pfam (PF02790) | Chlamydomonas reinhardtii | |
| 13 | IA, LE, UA, W, XE... (2C, 3C, 4C, 7C, 8C...) | cytochrome-c oxidase | polymer | 153 | 17270.0 | 6 | UniProt (Q9AU02) Pfam (PF00116) | Chlamydomonas reinhardtii | Cytochrome c oxidase polypeptide II |
| 14 | AE, JA, ME, VA, X... (2D, 3D, 4D, 7D, 8D...) | Cytochrome c oxidase subunit 3 | polymer | 382 | 41453.9 | 6 | UniProt (Q9FV97) Pfam (PF00510) | Chlamydomonas reinhardtii | |
| 15 | BE, KA, NE, WA, Y... (2E, 3E, 4E, 7E, 8E...) | Cox5b | polymer | 175 | 19051.6 | 6 | UniProt (A8HRZ4) | Chlamydomonas reinhardtii | |
| 16 | AF, CE, LA, OE, XA... (2F, 3F, 4F, 7F, 8F...) | Cox5c | polymer | 96 | 10886.3 | 6 | UniProt (A8J7H8) | Chlamydomonas reinhardtii | |
| 17 | AA, BF, DE, MA, PE... (2G, 3G, 4G, 7G, 8G...) | Cox6a | polymer | 125 | 13985.0 | 6 | UniProt (A0A2K3D591) | Chlamydomonas reinhardtii | |
| 18 | BA, CF, EE, NA, QE... (2H, 3H, 4H, 7H, 8H...) | Cox6b | polymer | 148 | 17277.3 | 6 | UniProt (A8IN92) Pfam (PF02297) | Chlamydomonas reinhardtii | |
| 19 | AB, CA, DF, FE, OA... (2I, 3I, 4I, 7I, 8I...) | Cox7c | polymer | 101 | 11356.9 | 6 | UniProt (A8IU42) | Chlamydomonas reinhardtii | |
| 20 | BB, DA, EF, GE, PA... (2J, 3J, 4J, 7J, 8J...) | Cytochrome c oxidase subunit | polymer | 105 | 11694.4 | 6 | UniProt (Q8LK22) | Chlamydomonas reinhardtii | |
| 21 | CB, EA, FF, HE, QA... (2K, 3K, 4K, 7K, 8K...) | Cox7a | polymer | 58 | 6532.4 | 6 | UniProt (A0A2K3D1M1) | Chlamydomonas reinhardtii | |
| 22 | DB, FA, GF, IE, RA... (2L, 3L, 4L, 7L, 8L...) | CoxIn | polymer | 87 | 9905.3 | 6 | UniProt (A8JEU7) | Chlamydomonas reinhardtii | |
| 23 | EB, HF (5A, A) | NADH:ubiquinone oxidoreductase 24 kD subunit | polymer | 282 | 30644.0 | 2 | UniProt (Q6V9B3) Pfam (PF01257) | Chlamydomonas reinhardtii | |
| 24 | FB, IF (5B, B) | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial | polymer | 484 | 52303.1 | 2 | UniProt (A8ICJ1) Pfam (PF01512) Pfam (PF22461) Pfam (PF10589) | Chlamydomonas reinhardtii | |
| 25 | GB, JF (5C, C) | NADH:ubiquinone oxidoreductase 78 kDa subunit | polymer | 733 | 78432.7 | 2 | UniProt (Q6UKY6) Pfam (PF13510) Pfam (PF10588) Pfam (PF22117) Pfam (PF22151) Pfam (PF00384) Pfam (PF09326) UniProt (by SIFTS) (A8IVJ7) | Chlamydomonas reinhardtii | |
| 26 | HB, KF (5D, D) | NADH:ubiquinone oxidoreductase 30kDa subunit domain-containing protein | polymer | 282 | 32178.6 | 2 | UniProt (A8IHL3) Pfam (PF00329) | Chlamydomonas reinhardtii | |
| 27 | IB, LF (5E, E) | NADH:ubiquinone oxidoreductase 49 kD subunit | polymer | 467 | 52672.5 | 2 | UniProt (Q6V9A8) Pfam (PF00346) | Chlamydomonas reinhardtii | |
| 28 | JB, MF (5F, F) | NADH:ubiquinone oxidoreductase subunit 10 | polymer | 164 | 18144.2 | 2 | UniProt (Q6V9B0) Pfam (PF01058) | Chlamydomonas reinhardtii | |
| 29 | KB, NF (5G, G) | NADH:ubiquinone oxidoreductase subunit 8 | polymer | 231 | 26530.2 | 2 | UniProt (Q6V9B1) Pfam (PF12838) | Chlamydomonas reinhardtii | |
| 30 | LB, OF (5H, H) | B14.5a | polymer | 118 | 13790.1 | 2 | UniProt (A8JHV4) | Chlamydomonas reinhardtii | |
| 31 | MB, PF (5I, I) | Mitochondrial NADH:ubiquinone oxidoreductase 18 kDa subunit | polymer | 165 | 17977.6 | 2 | UniProt (Q6UKY3) Pfam (PF04716) | Chlamydomonas reinhardtii | |
| 32 | NB, QF, VC, YG (5J, 5r, J, r) | Acyl carrier protein | polymer | 128 | 13682.5 | 4 | UniProt (Q6UKY4) Pfam (PF00550) | Chlamydomonas reinhardtii | |
| 33 | OB, RF (5K, K) | NADH:ubiquinone oxidoreductase B14 subunit | polymer | 138 | 16135.9 | 2 | UniProt (Q6UKY9) | Chlamydomonas reinhardtii | |
| 34 | PB, SF (5L, L) | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | polymer | 187 | 20648.5 | 2 | UniProt (Q6UP29) Pfam (PF04800) | Chlamydomonas reinhardtii | |
| 35 | QB, TF (5M, M) | NADH:ubiquinone oxidoreductase 13 kD-like subunit | polymer | 154 | 16306.5 | 2 | UniProt (Q6UP30) | Chlamydomonas reinhardtii | |
| 36 | RB, UF (5N, N) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 | polymer | 156 | 18034.0 | 2 | UniProt (Q6UP31) Pfam (PF05071) | Chlamydomonas reinhardtii | |
| 37 | SB, VF (5O, O) | NADH:ubiquinone oxidoreductase B8 subunit | polymer | 101 | 11012.5 | 2 | UniProt (Q6V9A9) Pfam (PF05047) | Chlamydomonas reinhardtii | |
| 38 | TB, WF (5P, P) | Putative NADH:ubiquinone oxidoreductase 39 kDa subunit | polymer | 397 | 43709.2 | 2 | UniProt (Q6V506) Pfam (PF01370) | Chlamydomonas reinhardtii | |
| 39 | UB, XF (5Q, Q) | NADH-ubiquinone oxidoreductase chain 1 | polymer | 292 | 31606.4 | 2 | UniProt (P11658) Pfam (PF00146) | Chlamydomonas reinhardtii | NADH dehydrogenase subunit 1 |
| 40 | VB, YF (5R, R) | NADH-ubiquinone oxidoreductase chain 2 | polymer | 387 | 42834.1 | 2 | UniProt (P08740) Pfam (PF00361) | Chlamydomonas reinhardtii | NADH dehydrogenase subunit 2 |
| 41 | WB, ZF (5S, S) | NADH-ubiquinone oxidoreductase chain 3 | polymer | 279 | 30207.5 | 2 | UniProt (Q6V502) Pfam (PF00507) | Chlamydomonas reinhardtii | NADH dehydrogenase subunit 3 |
| 42 | AG, XB (5T, T) | NADH-ubiquinone oxidoreductase chain 4 | polymer | 443 | 48766.7 | 2 | UniProt (P20113) Pfam (PF00361) | Chlamydomonas reinhardtii | NADH dehydrogenase subunit 4 |
| 43 | BG, YB (5U, U) | NADH dehydrogenase subunit 4L | polymer | 227 | 24258.4 | 2 | UniProt (Q84K56) Pfam (PF00420) | Chlamydomonas reinhardtii | |
| 44 | CG, ZB (5V, V) | NADH-ubiquinone oxidoreductase chain 5 | polymer | 546 | 59087.4 | 2 | UniProt (P08739) Pfam (PF00662) Pfam (PF00361) | Chlamydomonas reinhardtii | NADH dehydrogenase subunit 5 |
| 45 | AC, DG (5W, W) | NADH-ubiquinone oxidoreductase chain 6 | polymer | 162 | 17756.3 | 2 | UniProt (P10329) Pfam (PF00499) | Chlamydomonas reinhardtii | NADH dehydrogenase subunit 6 |
| 46 | BC, EG (5X, X) | ASHI | polymer | 149 | 17110.6 | 2 | UniProt (A8JCW1) | Chlamydomonas reinhardtii | |
| 47 | CC, FG (5Y, Y) | P9 | polymer | 64 | 6764.6 | 2 | UniProt (A0A2K3DYZ8) | Chlamydomonas reinhardtii | |
| 48 | DC, GG (5Z, Z) | KFYI | polymer | 124 | 13848.6 | 2 | UniProt (A8J6N0) | Chlamydomonas reinhardtii | |
| 49 | EC, HG (5a, a) | AGGG | polymer | 129 | 14270.9 | 2 | UniProt (A8J815) | Chlamydomonas reinhardtii | |
| 50 | FC, IG (5b, b) | ESSS | polymer | 172 | 19630.5 | 2 | UniProt (A8J843) | Chlamydomonas reinhardtii | |
| 51 | GC, JG (5c, c) | B9 | polymer | 67 | 7334.7 | 2 | UniProt (A8IVG9) | Chlamydomonas reinhardtii | |
| 52 | HC, KG (5d, d) | Mitochondrial NADH:ubiquinone oxidoreductase 10 kDa subunit | polymer | 86 | 9994.4 | 2 | UniProt (Q6QAY2) | Chlamydomonas reinhardtii | |
| 53 | IC, LG (5e, e) | Mitochondrial NADH:ubiquinone oxidoreductase 23 kDa subunit | polymer | 219 | 23390.8 | 2 | UniProt (Q6QAY4) Pfam (PF02466) | Chlamydomonas reinhardtii | |
| 54 | JC, MG (5f, f) | Mitochondrial NADH:ubiquinone oxidoreductase 7.5 kDa subunit | polymer | 65 | 7651.8 | 2 | UniProt (Q6QIV4) Pfam (PF15879) | Chlamydomonas reinhardtii | |
| 55 | KC, NG (5g, g) | Mitochondrial putative NADH:ubiquinone oxidoreductase 6.5 kDa subunit | polymer | 55 | 6497.4 | 2 | UniProt (Q6QIV8) Pfam (PF08122) | Chlamydomonas reinhardtii | |
| 56 | LC, OG (5h, h) | Mitochondrial NADH:ubiquinone oxidoreductase 13 kDa subunit | polymer | 142 | 16187.2 | 2 | UniProt (Q6QIV9) | Chlamydomonas reinhardtii | |
| 57 | MC, PG (5i, i) | NADH:ubiquinone oxidoreductase 15 kDa subunit-like | polymer | 81 | 9566.0 | 2 | UniProt (Q6TH88) Pfam (PF10200) | Chlamydomonas reinhardtii | |
| 58 | NC, QG (5j, j) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 | polymer | 86 | 10295.9 | 2 | UniProt (Q6UKY7) Pfam (PF05676) | Chlamydomonas reinhardtii | |
| 59 | OC, RG (5k, k) | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 | polymer | 117 | 13951.1 | 2 | UniProt (Q6UKY8) Pfam (PF05347) | Chlamydomonas reinhardtii | Complex I-B22,NADH-ubiquinone oxidoreductase B22 subunit |
| 60 | PC, SG (5l, l) | NADH:ubiquinone oxidoreductase 20,9 kD-like subunit | polymer | 121 | 13461.3 | 2 | UniProt (Q6UP28) Pfam (PF10785) | Chlamydomonas reinhardtii | |
| 61 | QC, TG (5m, m) | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 | polymer | 142 | 16400.1 | 2 | UniProt (Q6UP32) Pfam (PF06212) | Chlamydomonas reinhardtii | |
| 62 | RC, UG (5n, n) | Putative NADH:ubiquinone oxidoreductase 12.5 kDa subunit | polymer | 106 | 12542.4 | 2 | UniProt (Q6V504) | Chlamydomonas reinhardtii | |
| 63 | SC, VG (5o, o) | Putative NADH:ubiquinone oxidoreductase 17.8 kDa subunit | polymer | 155 | 17907.2 | 2 | UniProt (Q6V505) | Chlamydomonas reinhardtii | |
| 64 | TC, WG (5p, p) | Mitochondrial NADH:ubiquinone oxidoreductase 16 kDa subunit | polymer | 130 | 15292.0 | 2 | UniProt (Q6QAY0) | Chlamydomonas reinhardtii | |
| 65 | UC, XG (5q, q) | Mitochondrial NADH:ubiquinone oxidoreductase 19 kDa subunit | polymer | 197 | 22349.1 | 2 | UniProt (Q6QAY1) | Chlamydomonas reinhardtii | |
| 66 | WC, ZG (5s, s) | Mitochondrial NADH:ubiquinone oxidoreductase 32 kDa subunit | polymer | 312 | 32729.1 | 2 | UniProt (Q6S7R7) Pfam (PF00132) | Chlamydomonas reinhardtii | Putative gamma carbonic anhydrase |
| 67 | AH, XC (5t, t) | CAG2 - CA-like | polymer | 279 | 31209.6 | 2 | UniProt (A8JFK6) | Chlamydomonas reinhardtii | |
| 68 | BH, YC (5u, u) | CAG1 | polymer | 229 | 24319.6 | 2 | UniProt (A8JHY4) Pfam (PF00132) | Chlamydomonas reinhardtii | |
| 69 | CH, ZC (5v, v) | P10 | polymer | 45 | 5122.8 | 2 | Chlamydomonas reinhardtii | ||
| 70 | AD, DH (5w, w) | Mitochondrial NADH:ubiquinone oxidoreductase 9 kDa subunit | polymer | 109 | 12159.1 | 2 | UniProt (Q6QAY5) | Chlamydomonas reinhardtii | |
| 71 | BD, EH (5x, x) | NUOP8 | polymer | 157 | 17157.4 | 2 | UniProt (A8IS53) | Chlamydomonas reinhardtii | |
| 72 | CD, FH (5y, y) | NUOP7 | polymer | 118 | 13655.9 | 2 | UniProt (A8JA22) | Chlamydomonas reinhardtii | |
| 73 | GH, HH, IH, JH, RI... (1A, 1B, 6A, 6B) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 8 | Chemie (HEM) | |||
| 74 | KH, LH, VI, WI (1E, 1F, 6E, 6F) | HEME C | non-polymer | 618.5 | 4 | Chemie (HEC) | |||
| 75 | BK, MH, NH, QI, XI... (s, 1M, 1N, 5s, 6M...) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
| 76 | AJ, BI, EJ, HJ, KJ... (7A, 4A, 8A, 9A, 2A...) | HEME-A | non-polymer | 852.8 | 12 | Chemie (HEA) | |||
| 77 | BJ, FJ, MJ, QH, UH... (7A, 8A, 9A, 2A, 3A...) | COPPER (II) ION | non-polymer | 63.5 | 6 | Chemie (CU) | |||
| 78 | AI, CJ, GJ, JJ, RH... (4A, 7A, 8A, 9A, 2A...) | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
| 79 | CI, DJ, IJ, NJ, SH... (4C, 7C, 8C, 9C, 2C...) | DINUCLEAR COPPER ION | non-polymer | 127.1 | 6 | Chemie (CUA) | |||
| 80 | DI, GI, OJ, TJ (5A, 5C, A, C) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 4 | Chemie (FES) | |||
| 81 | EI, QJ (5B, B) | FLAVIN MONONUCLEOTIDE | non-polymer | 456.3 | 2 | Chemie (FMN) | |||
| 82 | FI, HI, II, JI, KI... (5B, 5C, 5F, 5G, B...) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 12 | Chemie (SF4) | |||
| 83 | MI, OI, XJ, ZJ (5J, 5k, J, k) | S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate | non-polymer | 540.7 | 4 | Chemie (8Q1) | |||
| 84 | NI, YJ (5P, P) | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 745.4 | 2 | Chemie (NDP) | |||
| 85 | AK, PI (s, 5s) | CROTONYL COENZYME A | non-polymer | 835.6 | 2 | Chemie (COO) |
Sequence modifications
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 214 |
| Total formula weight | 4769474.0 | |
| Non-Polymers* | Number of molecules | 74 |
| Total formula weight | 30482.4 | |
| All* | Total formula weight | 4799956.3 |
