9F28
Crystal structure of the heterodimeric primase from pyrococcus abyssi (deletion of the PriL-CTD domain)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | DNA primase small subunit PriS | polymer | 351 | 41050.0 | 1 | UniProt (Q9V292) Pfam (PF01896) | Pyrococcus abyssi | DNA primase 41 kDa subunit,Pabp41,p41 |
2 | B (B) | DNA primase large subunit PriL | polymer | 223 | 26147.1 | 1 | UniProt (Q9V291) Pfam (PF04104) | Pyrococcus abyssi | DNA primase 46 kDa subunit,Pabp46,p46 |
3 | C (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
4 | D, E (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
5 | F, G (A, B) | FORMIC ACID | non-polymer | 46.0 | 2 | Chemie (FMT) | |||
6 | H, I (A, B) | water | water | 18.0 | 611 | Chemie (HOH) |
Sequence modifications
A: 1 - 345 (UniProt: Q9V292)
B: 1 - 215 (UniProt: Q9V291)
PDB | External Database | Details |
---|---|---|
Gly -5 | - | expression tag |
Thr -4 | - | expression tag |
Gly -3 | - | expression tag |
Asp -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Asp 216 | - | expression tag |
Ile 217 | - | expression tag |
Gly 218 | - | expression tag |
Arg 219 | - | expression tag |
Pro 220 | - | expression tag |
Arg 221 | - | expression tag |
Asp 222 | - | expression tag |
Arg 223 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 67197.1 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 206.1 | |
All* | Total formula weight | 67403.2 |