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9F28

Crystal structure of the heterodimeric primase from pyrococcus abyssi (deletion of the PriL-CTD domain)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA primase small subunit PriSpolymer35141050.01UniProt (Q9V292)
Pfam (PF01896)
Pyrococcus abyssiDNA primase 41 kDa subunit,Pabp41,p41
2B
(B)
DNA primase large subunit PriLpolymer22326147.11UniProt (Q9V291)
Pfam (PF04104)
Pyrococcus abyssiDNA primase 46 kDa subunit,Pabp46,p46
3C
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
4D, E
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5F, G
(A, B)
FORMIC ACIDnon-polymer46.02Chemie (FMT)
6H, I
(A, B)
waterwater18.0611Chemie (HOH)
Sequence modifications
A: 1 - 345 (UniProt: Q9V292)
PDBExternal DatabaseDetails
Gly -5-expression tag
Thr -4-expression tag
Gly -3-expression tag
Asp -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
B: 1 - 215 (UniProt: Q9V291)
PDBExternal DatabaseDetails
Asp 216-expression tag
Ile 217-expression tag
Gly 218-expression tag
Arg 219-expression tag
Pro 220-expression tag
Arg 221-expression tag
Asp 222-expression tag
Arg 223-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight67197.1
Non-Polymers*Number of molecules5
Total formula weight206.1
All*Total formula weight67403.2
*Water molecules are not included.

238268

PDB entries from 2025-07-02

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