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9F0U

Structure of KPC-2 complexed with benzoxaborole AK-425

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Carbapenem-hydrolyzing beta-lactamase KPCpolymer29030806.61UniProt (Q9F663)
Pfam (PF00144)
Pfam (PF13354)
Klebsiella pneumoniaeCarbapenem-hydrolyzing beta-lactamase KPC-1
2B
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
3C, D, F, G
(A)
SULFATE IONnon-polymer96.14Chemie (SO4)
4E
(A)
(9S)-7-oxidanyl-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-triene-9-carbonitrilenon-polymer158.91Chemie (XR9)
5H
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
6I
(A)
waterwater18.0411Chemie (HOH)
Sequence modifications
A: 26 - 294 (UniProt: Q9F663)
PDBExternal DatabaseDetails
Met 5-initiating methionine
Gly 6-expression tag
Ser 7-expression tag
Ser 8-expression tag
His 9-expression tag
His 10-expression tag
His 11-expression tag
His 12-expression tag
His 13-expression tag
His 14-expression tag
Ser 15-expression tag
Ser 16-expression tag
Gly 17-expression tag
Leu 18-expression tag
Val 19-expression tag
Pro 20-expression tag
Arg 21-expression tag
Gly 22-expression tag
Ser 23-expression tag
His 24-expression tag
Met 25-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight30806.6
Non-Polymers*Number of molecules7
Total formula weight658.3
All*Total formula weight31464.9
*Water molecules are not included.

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PDB entries from 2025-06-25

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