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9F0Q

VIM-2 in complex with GKV53 (5d) - dynamically chiral phosphonic acid-type metallo-beta-lactamase inhibitors

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Metallo-beta-lactamase type 2polymer25427351.32UniProt (B8QIQ9)
Pfam (PF00753)
UniProt (by SIFTS) (A0A0F7KYQ8)
Pseudomonas aeruginosaB2 metallo-beta-lactamase,Metallo-beta-lactamase type II
2C, D, I, J
(A, B)
FORMIC ACIDnon-polymer46.04Chemie (FMT)
3E, L
(A, B)
[(S)-(1-benzothiophen-3-ylcarbonylamino)-(2-hydroxyphenyl)methyl]phosphonic acidnon-polymer363.32Chemie (A1IJ9)
4F, G, H, M, N...
(A, B)
ZINC IONnon-polymer65.46Chemie (ZN)
5K
(B)
[(R)-(1-benzothiophen-3-ylcarbonylamino)-(2-hydroxyphenyl)methyl]phosphonic acidnon-polymer363.31Chemie (A1H8W)
6P, Q
(A, B)
waterwater18.0466Chemie (HOH)
Sequence modifications
A, B: 27 - 266 (UniProt: B8QIQ9)
PDBExternal DatabaseDetails
Met 13-initiating methionine
His 14-expression tag
His 15-expression tag
His 16-expression tag
His 17-expression tag
His 18-expression tag
His 19-expression tag
Glu 20-expression tag
Asn 21-expression tag
Leu 22-expression tag
Tyr 23-expression tag
Phe 24-expression tag
Gln 25-expression tag
Gly 26-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight54702.6
Non-Polymers*Number of molecules13
Total formula weight1666.5
All*Total formula weight56369.1
*Water molecules are not included.

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PDB entries from 2025-07-02

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