9ENT
SSX structure of Autotaxin in cryogenic conditions
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 | polymer | 862 | 98912.3 | 1 | UniProt (Q64610) In PDB | Rattus norvegicus (Norway rat) | E-NPP 2,Autotaxin,Extracellular lysophospholipase D,LysoPLD |
2 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 627.6 | 1 | In PDB GlyTouCan (G47362BJ) | |||
3 | A | 7alpha-hydroxycholesterol | non-polymer | 402.7 | 1 | Chemie (5JK) | |||
4 | A | THIOCYANATE ION | non-polymer | 58.1 | 1 | Chemie (SCN) | |||
5 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
6 | A | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
7 | A | IODIDE ION | non-polymer | 126.9 | 15 | Chemie (IOD) | |||
8 | A | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
9 | water | water | 18.0 | 449 | Chemie (HOH) |
Sequence modifications
A: 1 - 862 (UniProt: Q64610)
PDB | External Database | Details |
---|---|---|
- | Glu 592 | deletion |
- | Ala 593 | deletion |
- | Glu 594 | deletion |
- | Thr 595 | deletion |
- | Gly 596 | deletion |
- | Lys 597 | deletion |
- | Phe 598 | deletion |
- | Arg 599 | deletion |
- | Gly 600 | deletion |
- | Ser 601 | deletion |
- | Lys 602 | deletion |
- | His 603 | deletion |
- | Glu 604 | deletion |
- | Asn 605 | deletion |
- | Lys 606 | deletion |
- | Lys 607 | deletion |
- | Asn 608 | deletion |
- | Leu 609 | deletion |
- | Asn 610 | deletion |
- | Gly 611 | deletion |
- | Ser 612 | deletion |
- | Val 613 | deletion |
- | Glu 614 | deletion |
- | Pro 615 | deletion |
- | Arg 616 | deletion |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 98912.3 | |
Branched | Number of molecules | 1 |
Total formula weight | 627.6 | |
Non-Polymers* | Number of molecules | 23 |
Total formula weight | 2604.2 | |
All* | Total formula weight | 102144.1 |