9EML
SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and m7GpppA (Cap0-analog)/m7GpppAm (Cap1-analog)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | 2'-O-methyltransferase nsp16 | polymer | 304 | 34150.1 | 1 | UniProt (P0DTD1) Pfam (PF06460) In PDB | Severe acute respiratory syndrome coronavirus 2 | Non-structural protein 16,nsp16 |
2 | B | Non-structural protein 10 | polymer | 140 | 14860.0 | 1 | UniProt (P0DTD1) Pfam (PF09401) In PDB | Severe acute respiratory syndrome coronavirus 2 | nsp10,Growth factor-like peptide,GFL |
3 | A | P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE | non-polymer | 787.4 | 1 | Chemie (GTA) | |||
4 | A, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 13 | Chemie (EDO) | |||
5 | A | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 1 | Chemie (SAM) | |||
6 | A | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 1 | Chemie (MES) | |||
7 | A | {[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID | non-polymer | 292.2 | 1 | Chemie (EDT) | |||
8 | A | 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-(2'-O-METHYL)-ADENOSINE | non-polymer | 801.5 | 1 | Chemie (V9G) | |||
9 | B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
10 | water | water | 18.0 | 235 | Chemie (HOH) |
Sequence modifications
A: 6799 - 7096 (UniProt: P0DTD1)
B: 4254 - 4392 (UniProt: P0DTD1)
PDB | External Database | Details |
---|---|---|
Glu 7097 | - | expression tag |
Asn 7098 | - | expression tag |
Leu 7099 | - | expression tag |
Tyr 7100 | - | expression tag |
Phe 7101 | - | expression tag |
Gln 7102 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 4253 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 49010.1 | |
Non-Polymers* | Number of molecules | 20 |
Total formula weight | 3412.5 | |
All* | Total formula weight | 52422.6 |