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9EML

SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and m7GpppA (Cap0-analog)/m7GpppAm (Cap1-analog)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
2'-O-methyltransferase nsp16polymer30434150.11UniProt (P0DTD1)
Pfam (PF06460)
Severe acute respiratory syndrome coronavirus 2Non-structural protein 16,nsp16
2B
(B)
Non-structural protein 10polymer14014860.01UniProt (P0DTD1)
Pfam (PF09401)
Severe acute respiratory syndrome coronavirus 2nsp10,Growth factor-like peptide,GFL
3C
(A)
P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATEnon-polymer787.41Chemie (GTA)
4D, G, H, I, J...
(A, B)
1,2-ETHANEDIOLnon-polymer62.113Chemie (EDO)
5E
(A)
S-ADENOSYLMETHIONINEnon-polymer398.41Chemie (SAM)
6F
(A)
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.21Chemie (MES)
7O
(A)
{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACIDnon-polymer292.21Chemie (EDT)
8R
(A)
7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-(2'-O-METHYL)-ADENOSINEnon-polymer801.51Chemie (V9G)
9S, T
(B)
ZINC IONnon-polymer65.42Chemie (ZN)
10W, X
(A, B)
waterwater18.0235Chemie (HOH)
Sequence modifications
A: 6799 - 7096 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Glu 7097-expression tag
Asn 7098-expression tag
Leu 7099-expression tag
Tyr 7100-expression tag
Phe 7101-expression tag
Gln 7102-expression tag
B: 4254 - 4392 (UniProt: P0DTD1)
PDBExternal DatabaseDetails
Gly 4253-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight49010.1
Non-Polymers*Number of molecules20
Total formula weight3412.5
All*Total formula weight52422.6
*Water molecules are not included.

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PDB entries from 2025-06-18

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