9EMK
DupA from legionella covalently bound to ubiquitin-based probe
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (A, C, E) | Septation initiation protein | polymer | 347 | 39498.6 | 3 | UniProt (A0A3A6VNK6) Pfam (PF12252) | Legionella pneumophila subsp. pneumophila | |
| 2 | B, D, F (B, D, F) | Polyubiquitin-B | polymer | 76 | 8504.7 | 3 | UniProt (P0CG47) Pfam (PF00240) | Homo sapiens | |
| 3 | G, H, I (A, C, E) | [(2~{R},3~{S},4~{R},5~{S})-5-[(1-ethyl-1,2,3-triazol-4-yl)methoxy]-3,4-bis(oxidanyl)oxolan-2-yl]methyl ethanesulfonate | non-polymer | 323.3 | 3 | Chemie (A1H50) | |||
| 4 | J, K, L, M, N... (A, B, C, D, E...) | water | water | 18.0 | 240 | Chemie (HOH) |
Sequence modifications
A, C, E: 4 - 345 (UniProt: A0A3A6VNK6)
B, D, F: 1 - 76 (UniProt: P0CG47)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ala 0 | - | expression tag |
| Met 1 | - | expression tag |
| Gly 2 | - | expression tag |
| Ser 3 | - | expression tag |
| Asp 228 | Ala 228 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Aba 42 | Arg 42 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 144009.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 970.0 | |
| All* | Total formula weight | 144979.9 |
