9ELR
env2 cobalamin riboswitch aptamer domain in complex with ethynyl-2-naphthalenepropiolate-cobalamin
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | RNA (76-MER) | polymer | 76 | 24731.7 | 2 | marine metagenome | ||
| 2 | C, P (A, B) | naphthalen-2-yl 3-[(3~{R},4~{R},5~{R},9~{S},14~{S},15~{S},19~{S},20~{S},21~{R})-4,15,20-tris(2-azanyl-2-oxidanylidene-ethyl)-9,14,19-tris(3-azanyl-3-oxidanylidene-propyl)-5-[3-[[(2~{R})-2-[[(2~{R},3~{S},4~{R},5~{S})-5-(5,6-dimethylbenzimidazol-1-yl)-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl]oxy-oxidanyl-phosphoryl]oxypropyl]amino]-3-oxidanylidene-propyl]-5,7,10,10,15,17,20,21-octamethyl-22-aza-2,23,24-triazonia-1$l^{5}-cobaltaoctacyclo[11.9.1.1^{1,8}.0^{2,6}.0^{3,21}.0^{16,23}.0^{18,22}.0^{11,24}]tetracosa-2(6),7,11(24),12,16(23),17-hexaen-1-yl]prop-2-ynoate | non-polymer | 1525.5 | 2 | Chemie (A1BI7) | |||
| 3 | D, Q (A, B) | N-methylpropane-1,3-diamine | non-polymer | 88.2 | 2 | Chemie (N3D) | |||
| 4 | E, R (A, B) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 2 | Chemie (TRS) | |||
| 5 | AA, BA, F, G, H... (B, A) | MAGNESIUM ION | non-polymer | 24.3 | 19 | Chemie (MG) | |||
| 6 | CA, O (B, A) | POTASSIUM ION | non-polymer | 39.1 | 2 | Chemie (K) | |||
| 7 | DA, EA (A, B) | water | water | 18.0 | 416 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 49463.4 | |
| Non-Polymers* | Number of molecules | 27 |
| Total formula weight | 4011.7 | |
| All* | Total formula weight | 53475.1 |






