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9EJQ

Crystal structure of DDB1 in complex with XS381952

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA damage-binding protein 1polymer1142127255.61UniProt (Q16531)
Pfam (PF10433)
Pfam (PF03178)
Homo sapiens (human)DDB p127 subunit,DNA damage-binding protein a,DDBa,Damage-specific DNA-binding protein 1,HBV X-associated protein 1,XAP-1,UV-damaged DNA-binding factor,UV-damaged DNA-binding protein 1,UV-DDB 1,XPE-binding factor,XPE-BF,Xeroderma pigmentosum group E-complementing protein,XPCe
2B, C
(A)
L(+)-TARTARIC ACIDnon-polymer150.12Chemie (TLA)
3D, E, K, L, M...
(A)
GLYCEROLnon-polymer92.16Chemie (GOL)
4F
(A)
(4S)-4-(3-ethoxyphenyl)-3-methyl-1-[(4R)-[1,2,4]triazolo[4,3-b]pyridazin-6-yl]-1,4,5,7-tetrahydro-6H-pyrazolo[3,4-b]pyridin-6-onenon-polymer389.41Chemie (A1BIX)
5G, H, I, J, N
(A)
1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
6P, Q, R, S, T...
(A)
SULFATE IONnon-polymer96.17Chemie (SO4)
7AA, W, X, Y, Z
(A)
UNKNOWN ATOM OR IONnon-polymer5Chemie (UNX)
8BA
(A)
waterwater18.0618Chemie (HOH)
Sequence modifications
A: 1 - 1140 (UniProt: Q16531)
PDBExternal DatabaseDetails
Gly -1-expression tag
Ser 0-expression tag
Gln 418Asn 418conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight127255.6
Non-Polymers*Number of molecules26
Total formula weight2224.9
All*Total formula weight129480.6
*Water molecules are not included.

238268

PDB entries from 2025-07-02

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