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9EFR

Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with TO-600

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Hdac6 proteinpolymer35739725.02UniProt (A7YT55)
Pfam (PF00850)
UniProt (by SIFTS) (F8W4B7)
Danio rerio (zebrafish)Histone Deacetylase 6
2C, G
(A, B)
N-hydroxy-4-({(propane-2-sulfonyl)[(pyridin-3-yl)methyl]amino}methyl)benzamidenon-polymer363.42Chemie (A1BHX)
3D, H
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
4E, F, I, J, K
(A, B)
POTASSIUM IONnon-polymer39.15Chemie (K)
5L, M
(A, B)
waterwater18.0788Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight79449.9
Non-Polymers*Number of molecules9
Total formula weight1053.2
All*Total formula weight80503.1
*Water molecules are not included.

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PDB entries from 2025-07-16

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